fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G30500.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp010982 not found in 311aa AT1G30500.2 1st_1st 0.416413373 Ia
Pp034959 not found in 276aa AT1G72830.1 not_not 0.410334346 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G30500.2     --------MTSSIHELSDNIGSHEKQEQRDSH----FQPPIPSARNYESIVTSLVY--SD
pp034959_Pp1s31 ------------------------------------MQAPSSAPAVTESALPTMQAL-PQ
pp010982_Pp1s42 MHISFVDGHTAGNGSAARNWGSRTGDQIQSSFVTTSMQAPSSAPTDSESAIPTMQALPPQ
                                                    :*.* .:.   ** :.::    .:

AT1G30500.2     PGTT-------------------------------NSM--APGQYPYPDPYYRSIFAPPP
pp034959_Pp1s31 PGYATSGADDQPPRPPTGVPATGDYLLPHTQLELGHSMAQARAAYPFADPYFGGIVA---
pp010982_Pp1s42 PGYATSGSEDQPPRPPTGVPTAGEYLLPHTQLELGHSM--ARAAYPFADPYFGGIVA---
                ** :                               :**  * . **:.***: .*.*   

AT1G30500.2     QPYTG---VHLQLMGVQQQGVPLPSDAV-EEPVFVNAKQYHGILRRRQSRARLESQNKVI
pp034959_Pp1s31 -AYGAQAVIHPHMLGVQQARMPLPSEMMEEEPVYVNAKQYHGILRRRQSRAKAESENKLI
pp010982_Pp1s42 -AYGAQAVIHPHMLGVQQARMPLPSEMMEEEPVYVNAKQYHGILRRRQSRAKAESENKLI
                 .* .   :* :::****  :****: : ****:*****************: **:**:*

AT1G30500.2     KSRKPYLHESRHLHAIRRPRGCGGRFLNAK-KEDEHHEDS-----SHEEKSNLSAGKSAM
pp034959_Pp1s31 KSRKPYLHESRHQHALRRARGNGGRFLNTKTKDGESKANSDGSHGSHEGQSSQAANVSST
pp010982_Pp1s42 KSRKPYLHESRHQHALRRARGNGGRFLNTKAKEGDSKSNSDGNHGSHEGQSSQAGNVSST
                ************ **:**.** ******:* *:.: : :*     *** :*. :.. *: 

AT1G30500.2     AAS---------------------------------------------------------
pp034959_Pp1s31 RASHSGMGMLGGQGDNVNYHTSMMQHGQNNAYLNLHPPQSFHSSAFHTLPGGSESEDGGS
pp010982_Pp1s42 RASHSGMDMLSGQGDSVNYHNTMMQHGQNNAYLNLHPPQSFHSSAFHTLPGGSESGDGGS
                 **                                                         

AT1G30500.2     -------SGTS------
pp034959_Pp1s31 NGNNLVVSGSEHTAVAT
pp010982_Pp1s42 NGNNLVVSGSEHTAVAT
                       **:.
BoxShade v3.31 C (beta, 970507) Output
AT1G30500.2     - - - - - - - - M T S S I H E L S D N I G S H E K Q E Q R D S H - - - - F Q P P I P S A R N Y E S I V T S L V Y - - S D
pp034959_Pp1s31    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q A P S S A P A V T E S A L P T M Q A L - P Q
pp010982_Pp1s42    M H I S F V D G H T A G N G S A A R N W G S R T G D Q I Q S S F V T T S M Q A P S S A P T D S E S A I P T M Q A L P P Q
 
AT1G30500.2     P G T T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S M - - A P G Q Y P Y P D P Y Y R S I F A P P P
pp034959_Pp1s31    P G Y A T S G A D D Q P P R P P T G V P A T G D Y L L P H T Q L E L G H S M A Q A R A A Y P F A D P Y F G G I V A - - -
pp010982_Pp1s42    P G Y A T S G S E D Q P P R P P T G V P T A G E Y L L P H T Q L E L G H S M - - A R A A Y P F A D P Y F G G I V A - - -
 
AT1G30500.2     Q P Y T G - - - V H L Q L M G V Q Q Q G V P L P S D A V - E E P V F V N A K Q Y H G I L R R R Q S R A R L E S Q N K V I
pp034959_Pp1s31    - A Y G A Q A V I H P H M L G V Q Q A R M P L P S E M M E E E P V Y V N A K Q Y H G I L R R R Q S R A K A E S E N K L I
pp010982_Pp1s42    - A Y G A Q A V I H P H M L G V Q Q A R M P L P S E M M E E E P V Y V N A K Q Y H G I L R R R Q S R A K A E S E N K L I
 
AT1G30500.2     K S R K P Y L H E S R H L H A I R R P R G C G G R F L N A K - K E D E H H E D S - - - - - S H E E K S N L S A G K S A M
pp034959_Pp1s31    K S R K P Y L H E S R H Q H A L R R A R G N G G R F L N T K T K D G E S K A N S D G S H G S H E G Q S S Q A A N V S S T
pp010982_Pp1s42    K S R K P Y L H E S R H Q H A L R R A R G N G G R F L N T K A K E G D S K S N S D G N H G S H E G Q S S Q A G N V S S T
 
AT1G30500.2     A A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp034959_Pp1s31    R A S H S G M G M L G G Q G D N V N Y H T S M M Q H G Q N N A Y L N L H P P Q S F H S S A F H T L P G G S E S E D G G S
pp010982_Pp1s42    R A S H S G M D M L S G Q G D S V N Y H N T M M Q H G Q N N A Y L N L H P P Q S F H S S A F H T L P G G S E S G D G G S
 
AT1G30500.2     - - - - - - - S G T S - - - - - -
pp034959_Pp1s31    N G N N L V V S G S E H T A V A T
pp010982_Pp1s42    N G N N L V V S G S E H T A V A T
 
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