fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G30500.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028622 not found in 205aa AT1G30500.2 1st_1st 0.629179331 Ia
Pt024440 not found in 208aa AT1G30500.2 not_1st 0.613981762 II
Pt028621 not found in 223aa AT1G30500.2 not_1st 0.610942249 II
Pt028623 not found in 157aa AT1G30500.2 not_1st 0.443768996 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G30500.2     -------------MTSSIHELS----DNIGSHEKQEQRDSHFQPPIPSA-RNYESIVT-S
pt028623_POPTR_ ------------MMVGWLEILY--------------------QTTRPRS-----------
pt028621_POPTR_ MRFEFGDSVCITAMTSSLHDLSAGCPDNSEADEQQNESEPQIQSSSPAMAQAHPGFSTPN
pt024440_POPTR_ -------------MTSSVHDLS----DNSEAGEQQKHSEPQVQTSSPANALAHPGISPPN
pt028622_POPTR_ MRFEFGDSVCITAMTSSLHDLS----DNSEADEQQNESEPQIQSSSPAMAQAHPGFSTPN
                             *.. :. *                     *.. *             

AT1G30500.2     LVYSDP--GTTNSMAPGQYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQG
pt028623_POPTR_ ----------------IAFTYEQTFFFFLDTSNSHERTSNQ-------VHLQLMGIQQAG
pt028621_POPTR_ VQYATPQLGAGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAG
pt024440_POPTR_ FQYATPQLGAGHAMAPAAYPYPDPYYRSIFAPCDAQPYAPQPYGAQPMVHLQLMGIQQAG
pt028622_POPTR_ VQYATPQLGAGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAG
                                  :.* :.::  : :.      . *       *******:** *

AT1G30500.2     VPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRG
pt028623_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
pt028621_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
pt024440_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIKSRKPYLHESRHQHALKRARG
pt028622_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
                ******************************: **:.*.************* **::*.**

AT1G30500.2     CGGRFLNAKKED--EHHEDSSHEEKS----NLSAGKSAMAASSGTS
pt028623_POPTR_ CGGRFLNSKKQENQEHNGVASG-DKSQSNINLNSDKNDIVSSND--
pt028621_POPTR_ CGGRFLNSKKQENQEHNGVASG-DKSQSNINLNSDKNDIVSSND--
pt024440_POPTR_ CGGRFLNSKKKENQQQNGMAPG-DKSQSNVNLNANKNDIASLDDKS
pt028622_POPTR_ CGGRFLNSKKQENQEHNGVASGSDGGAHN-----------------
                *******:**::  :::  :.  : .
BoxShade v3.31 C (beta, 970507) Output
AT1G30500.2     - - - - - - - - - - - - - M T S S I H E L S - - - - D N I G S H E K Q E Q R D S H F Q P P I P S A - R N Y E S I V T - S
pt028623_POPTR_    - - - - - - - - - - - - M M V G W L E I L Y - - - - - - - - - - - - - - - - - - - - Q T T R P R S - - - - - - - - - - -
pt028621_POPTR_    M R F E F G D S V C I T A M T S S L H D L S A G C P D N S E A D E Q Q N E S E P Q I Q S S S P A M A Q A H P G F S T P N
pt024440_POPTR_    - - - - - - - - - - - - - M T S S V H D L S - - - - D N S E A G E Q Q K H S E P Q V Q T S S P A N A L A H P G I S P P N
pt028622_POPTR_    M R F E F G D S V C I T A M T S S L H D L S - - - - D N S E A D E Q Q N E S E P Q I Q S S S P A M A Q A H P G F S T P N
 
AT1G30500.2     L V Y S D P - - G T T N S M A P G Q Y P Y P D P Y Y R S I F A P - - - - - - P P Q P Y T G - - - V H L Q L M G V Q Q Q G
pt028623_POPTR_    - - - - - - - - - - - - - - - - I A F T Y E Q T F F F F L D T S N S H E R T S N Q - - - - - - - V H L Q L M G I Q Q A G
pt028621_POPTR_    V Q Y A T P Q L G A G H A M A P A T Y P Y P D P Y Y R S I F A P Y D P Q P Y P P Q P Y G A Q P M V H L Q L M G I Q Q A G
pt024440_POPTR_    F Q Y A T P Q L G A G H A M A P A A Y P Y P D P Y Y R S I F A P C D A Q P Y A P Q P Y G A Q P M V H L Q L M G I Q Q A G
pt028622_POPTR_    V Q Y A T P Q L G A G H A M A P A T Y P Y P D P Y Y R S I F A P Y D P Q P Y P P Q P Y G A Q P M V H L Q L M G I Q Q A G
 
AT1G30500.2     V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A R L E S Q N K V I K S R K P Y L H E S R H L H A I R R P R G
pt028623_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E S K A I K S R K P Y L H E S R H Q H A L K R A R G
pt028621_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E S K A I K S R K P Y L H E S R H Q H A L K R A R G
pt024440_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E N K A I K S R K P Y L H E S R H Q H A L K R A R G
pt028622_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E S K A I K S R K P Y L H E S R H Q H A L K R A R G
 
AT1G30500.2     C G G R F L N A K K E D - - E H H E D S S H E E K S - - - - N L S A G K S A M A A S S G T S
pt028623_POPTR_    C G G R F L N S K K Q E N Q E H N G V A S G - D K S Q S N I N L N S D K N D I V S S N D - -
pt028621_POPTR_    C G G R F L N S K K Q E N Q E H N G V A S G - D K S Q S N I N L N S D K N D I V S S N D - -
pt024440_POPTR_    C G G R F L N S K K K E N Q Q Q N G M A P G - D K S Q S N V N L N A N K N D I A S L D D K S
pt028622_POPTR_    C G G R F L N S K K Q E N Q E H N G V A S G S D G G A H N - - - - - - - - - - - - - - - - -
 
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