fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G30500.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041857 not found in 217aa AT1G30500.1 1st_not 0.437689969 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G30500.2     MTSSIHELSDNIGSHEKQEQR----------------DSHFQPPIPSARNYESIVTSLVY
Os041857_Os12t0 MTSVVHDVSGNHGADERQKQQRQGEPEDQQEASVTSTDSHTMVATPSTD----------Y
                *** :*::*.* *:.*:*:*:                ***   . **:           *

AT1G30500.2     SDPGTTNSMAP--GQYPYP--DPYYRSIFAPPPQPYTG---VHLQLMGVQQQGVPLPSDA
Os041857_Os12t0 ATPYAHHDMAHAMGQIAYANIDPYYGSLYA----AYGGQPMMHPPLVGMHPAGLPLPTDA
                : * : :.**   ** .*.  **** *::*    .* *   :*  *:*::  *:***:**

AT1G30500.2     VEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLN
Os041857_Os12t0 IEEPVYVNAKQYNAILRRRQSRAKAESEKKLVKGRKPYLHESRHQHALKRARGAGGRFLN
                :****:******:.*********: **::*::*.********** **::*.**.******

AT1G30500.2     AKKED-EHHEDSSHEEKSN---------LSAGKSAMAASSGTS--------
Os041857_Os12t0 SKSDDKEEHSDSSSRDKQDGVAPRDSGQPSTSPSSKGASSAKQNKKSKTSN
                :*.:* *.*.*** .:*.:          *:. *: .***...
BoxShade v3.31 C (beta, 970507) Output
AT1G30500.2     M T S S I H E L S D N I G S H E K Q E Q R - - - - - - - - - - - - - - - - D S H F Q P P I P S A R N Y E S I V T S L V Y
Os041857_Os12t0    M T S V V H D V S G N H G A D E R Q K Q Q R Q G E P E D Q Q E A S V T S T D S H T M V A T P S T D - - - - - - - - - - Y
 
AT1G30500.2     S D P G T T N S M A P - - G Q Y P Y P - - D P Y Y R S I F A P P P Q P Y T G - - - V H L Q L M G V Q Q Q G V P L P S D A
Os041857_Os12t0    A T P Y A H H D M A H A M G Q I A Y A N I D P Y Y G S L Y A - - - - A Y G G Q P M M H P P L V G M H P A G L P L P T D A
 
AT1G30500.2     V E E P V F V N A K Q Y H G I L R R R Q S R A R L E S Q N K V I K S R K P Y L H E S R H L H A I R R P R G C G G R F L N
Os041857_Os12t0    I E E P V Y V N A K Q Y N A I L R R R Q S R A K A E S E K K L V K G R K P Y L H E S R H Q H A L K R A R G A G G R F L N
 
AT1G30500.2     A K K E D - E H H E D S S H E E K S N - - - - - - - - - L S A G K S A M A A S S G T S - - - - - - - -
Os041857_Os12t0    S K S D D K E E H S D S S S R D K Q D G V A P R D S G Q P S T S P S S K G A S S A K Q N K K S K T S N
 
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