fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G30500.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031906 not found in 475aa AT1G30500.2 1st_1st 0.422492401 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G30500.2     -------------------------MTSSIHELSDNIGSH--EKQEQRDSHFQP------
Sb031906_Sorbi1 VVAVSVGGFAPCLVLIVLCLAKEGIMTSVVQSVS---GDHRAEDQHHQKKQAEPGDQQEA
                                         *** ::.:*   *.*  *.*.::..: :*      

AT1G30500.2     PIPSARNYESIVT-SLVYSDPGTTNSM--APGQYPYP--DPYYRSIFAPPPQPYTG---V
Sb031906_Sorbi1 PVTSSDSQPTVGTPSTDYVAPYAPHDMSHAMGQYAYPNIDPYYGSLYA----AYGGQPLM
                *:.*: .  :: * *  *  * :.:.*  * ***.**  **** *::*    .* *   :

AT1G30500.2     HLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHES
Sb031906_Sorbi1 HPPLVGMHPAGLPLPTDAIEEPVYVNAKQYNAILRRRQSRAKAESERKLVKGRKPYLHES
                *  *:*::  *:***:**:****:******:.*********: **:.*::*.********

AT1G30500.2     RHLHAIRRPRGCGGRFLNAKKED-EHHEDSSHEEKSN--------LSAGKSAMAASSGTS
Sb031906_Sorbi1 RHQHALKRARGAGGRFLNSKSDDKEENSDSSHKEKQNGVAPNNGQPSTPPSPNGASSANQ
                ** **::*.**.******:*.:* *.:.****:**.*         *:  *. .***...

AT1G30500.2     -----
Sb031906_Sorbi1 AGSRE
BoxShade v3.31 C (beta, 970507) Output
AT1G30500.2     - - - - - - - - - - - - - - - - - - - - - - - - - M T S S I H E L S D N I G S H - - E K Q E Q R D S H F Q P - - - - - -
Sb031906_Sorbi1    V V A V S V G G F A P C L V L I V L C L A K E G I M T S V V Q S V S - - - G D H R A E D Q H H Q K K Q A E P G D Q Q E A
 
AT1G30500.2     P I P S A R N Y E S I V T - S L V Y S D P G T T N S M - - A P G Q Y P Y P - - D P Y Y R S I F A P P P Q P Y T G - - - V
Sb031906_Sorbi1    P V T S S D S Q P T V G T P S T D Y V A P Y A P H D M S H A M G Q Y A Y P N I D P Y Y G S L Y A - - - - A Y G G Q P L M
 
AT1G30500.2     H L Q L M G V Q Q Q G V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A R L E S Q N K V I K S R K P Y L H E S
Sb031906_Sorbi1    H P P L V G M H P A G L P L P T D A I E E P V Y V N A K Q Y N A I L R R R Q S R A K A E S E R K L V K G R K P Y L H E S
 
AT1G30500.2     R H L H A I R R P R G C G G R F L N A K K E D - E H H E D S S H E E K S N - - - - - - - - L S A G K S A M A A S S G T S
Sb031906_Sorbi1    R H Q H A L K R A R G A G G R F L N S K S D D K E E N S D S S H K E K Q N G V A P N N G Q P S T P P S P N G A S S A N Q
 
AT1G30500.2     - - - - -
Sb031906_Sorbi1    A G S R E
 
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