fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G30500.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021082 not found in 206aa AT1G30500.2 not_1st 0.613981762 II
Gm023847 not found in 204aa AT1G30500.2 not_1st 0.607902735 II
Gm012663 not found in 206aa AT1G30500.2 not_1st 0.604863221 II
Gm012662 not found in 217aa AT1G30500.2 not_1st 0.604863221 II
Gm042050 not found in 205aa AT1G30500.2 not_1st 0.586626139 II
Gm042049 not found in 205aa AT1G30500.2 not_1st 0.586626139 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G30500.2     M----------TSSIHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVT---SLVYSDP
gm021082_Glyma0 -----------MTSAHDLTDN--EDDGQQQSESQIQSPSANGISDPDISTQNVNVQYATP
gm023847_Glyma0 -----------MTSTHDLSDN--EADDQQQSESQMEPLSANGISYAGIATQ--NVQYATP
gm042050_Glyma1 M----------TTSTRDISDN--EADEQQQSEPQMQHLSANGISHAGIGTQ--NVQYATP
gm012662_Glyma0 MVWTVLRASRNMTSAHDLTDN--EDDGQQQSESPMQPPSVNGISDPGISTQNVNVQYAAP
gm012663_Glyma0 -----------MTSAHDLTDN--EDDGQQQSESPMQPPSVNGISDPGISTQNVNVQYAAP
gm042049_Glyma1 M----------TTSTRDISDN--EADEQQQSEPQMQHLSANGISHAGIGTQ--NVQYATP
                            :* ::::**  . : *:* :. ::    .. .  .* *   .: *: *

AT1G30500.2     ---GTTNSMAPGQYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPS
gm021082_Glyma0 GQLGTGHAMVPPVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQQAGVPLPT
gm023847_Glyma0 SQLGTGHAVVPPTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAGVPLPT
gm042050_Glyma1 PQLGTGHAVVPPTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAGVPLPT
gm012662_Glyma0 GQLGTGHAMVPHVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQQAGVPLPT
gm012663_Glyma0 GQLGTGHAMVPHVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQQAGVPLPT
gm042049_Glyma1 PQLGTGHAVVPPTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAGVPLPT
                   ** :::.*  **************      ***.* *   *******:** *****:

AT1G30500.2     DAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRF
gm021082_Glyma0 DAVEEPVFVNAKQYHGILRRRQSRAKAESENKVIRNRKPYLHESRHKHALRRPRGCGGRF
gm023847_Glyma0 DTVEEPVFVNAKQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARGCGGRF
gm042050_Glyma1 DTVEEPVFVNAKQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARGCGGRF
gm012662_Glyma0 DAVEEPVFVNAKQYHGILRRRQYRAKAESENKIIRNRKPYLHESRHKHALTRPRGCGGRF
gm012663_Glyma0 DAVEEPVFVNAKQYHGILRRRQYRAKAESENKIIRNRKPYLHESRHKHALTRPRGCGGRF
gm042049_Glyma1 DTVEEPVFVNAKQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARGCGGRF
                *:******************** **: **::*  :.********** **: *.*******

AT1G30500.2     LNAKKEDEHHEDSSHEEKS----NLSAGKSAMAASSGTS
gm021082_Glyma0 LNSKKDENQHDDVTSADKSQSNINLNSNKNDQTSSDRTS
gm023847_Glyma0 LNSKKDENQQDEVASTDESQSTINLNSDKNELAPSDRTS
gm042050_Glyma1 LNSKKDENQQDEVASTDESQSNINLNSDKNELAPSDRTS
gm012662_Glyma0 LNSKKDKNQNDDVASADKSQSNININSNKNDQTSSDRAS
gm012663_Glyma0 LNSKKDKNQNDDVASADKSQSNININSNKNDQTSSDRAS
gm042049_Glyma1 LNSKKDENQQDEVASTDESQSNINLNSDKNELAPSDRTS
                **:**:.::::: :  ::*    *:.:.*.  :.*. :*
BoxShade v3.31 C (beta, 970507) Output
AT1G30500.2     M - - - - - - - - - - T S S I H E L S D N I G S H E K Q E Q R D S H F Q P P I P S A R N Y E S I V T - - - S L V Y S D P
gm021082_Glyma0    - - - - - - - - - - - M T S A H D L T D N - - E D D G Q Q Q S E S Q I Q S P S A N G I S D P D I S T Q N V N V Q Y A T P
gm023847_Glyma0    - - - - - - - - - - - M T S T H D L S D N - - E A D D Q Q Q S E S Q M E P L S A N G I S Y A G I A T Q - - N V Q Y A T P
gm042050_Glyma1    M - - - - - - - - - - T T S T R D I S D N - - E A D E Q Q Q S E P Q M Q H L S A N G I S H A G I G T Q - - N V Q Y A T P
gm012662_Glyma0    M V W T V L R A S R N M T S A H D L T D N - - E D D G Q Q Q S E S P M Q P P S V N G I S D P G I S T Q N V N V Q Y A A P
gm012663_Glyma0    - - - - - - - - - - - M T S A H D L T D N - - E D D G Q Q Q S E S P M Q P P S V N G I S D P G I S T Q N V N V Q Y A A P
gm042049_Glyma1    M - - - - - - - - - - T T S T R D I S D N - - E A D E Q Q Q S E P Q M Q H L S A N G I S H A G I G T Q - - N V Q Y A T P
 
AT1G30500.2     - - - G T T N S M A P G Q Y P Y P D P Y Y R S I F A P - - - - - - P P Q P Y T G - - - V H L Q L M G V Q Q Q G V P L P S
gm021082_Glyma0    G Q L G T G H A M V P P V Y P Y P D P Y Y R S I F A P Y D T Q P Y P P Q A Y S G Q P M V H L Q L M G I Q Q A G V P L P T
gm023847_Glyma0    S Q L G T G H A V V P P T Y P Y P D P Y Y R S I F A P Y D A Q T Y P P Q P Y G G N P M V H L Q L M G I Q Q A G V P L P T
gm042050_Glyma1    P Q L G T G H A V V P P T Y P Y P D P Y Y R S I F A P Y D A Q T Y P P Q P Y G G N P M V H L Q L M G I Q Q A G V P L P T
gm012662_Glyma0    G Q L G T G H A M V P H V Y P Y P D P Y Y R S I F A P Y D T Q P Y P P Q A Y S G Q P M V H L Q L M G I Q Q A G V P L P T
gm012663_Glyma0    G Q L G T G H A M V P H V Y P Y P D P Y Y R S I F A P Y D T Q P Y P P Q A Y S G Q P M V H L Q L M G I Q Q A G V P L P T
gm042049_Glyma1    P Q L G T G H A V V P P T Y P Y P D P Y Y R S I F A P Y D A Q T Y P P Q P Y G G N P M V H L Q L M G I Q Q A G V P L P T
 
AT1G30500.2     D A V E E P V F V N A K Q Y H G I L R R R Q S R A R L E S Q N K V I K S R K P Y L H E S R H L H A I R R P R G C G G R F
gm021082_Glyma0    D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E N K V I R N R K P Y L H E S R H K H A L R R P R G C G G R F
gm023847_Glyma0    D T V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E K K A A R N R K P Y L H E S R H L H A L R R A R G C G G R F
gm042050_Glyma1    D T V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E K K A A R N R K P Y L H E S R H L H A L R R A R G C G G R F
gm012662_Glyma0    D A V E E P V F V N A K Q Y H G I L R R R Q Y R A K A E S E N K I I R N R K P Y L H E S R H K H A L T R P R G C G G R F
gm012663_Glyma0    D A V E E P V F V N A K Q Y H G I L R R R Q Y R A K A E S E N K I I R N R K P Y L H E S R H K H A L T R P R G C G G R F
gm042049_Glyma1    D T V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E K K A A R N R K P Y L H E S R H L H A L R R A R G C G G R F
 
AT1G30500.2     L N A K K E D E H H E D S S H E E K S - - - - N L S A G K S A M A A S S G T S
gm021082_Glyma0    L N S K K D E N Q H D D V T S A D K S Q S N I N L N S N K N D Q T S S D R T S
gm023847_Glyma0    L N S K K D E N Q Q D E V A S T D E S Q S T I N L N S D K N E L A P S D R T S
gm042050_Glyma1    L N S K K D E N Q Q D E V A S T D E S Q S N I N L N S D K N E L A P S D R T S
gm012662_Glyma0    L N S K K D K N Q N D D V A S A D K S Q S N I N I N S N K N D Q T S S D R A S
gm012663_Glyma0    L N S K K D K N Q N D D V A S A D K S Q S N I N I N S N K N D Q T S S D R A S
gm042049_Glyma1    L N S K K D E N Q Q D E V A S T D E S Q S N I N L N S D K N E L A P S D R T S
 
0