fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G32510.1 FADLNFDLEMEDPFMFDY at 253/283 in AT1G32510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047190 not found in 302aa AT4G17980.1 1st_not 0.431372549 II
Pt012227 not found in 321aa AT4G17980.1 1st_not 0.450980392 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G32510.1     MVGSFLPPGFRFYPTDEELVGYYLHRRNEGLEIELEIIPLMDLYKFDPWELPEKSFLPNR
pt012227_POPTR_ MGGASLPPGFRFHPTDEELVGYYLHRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
gm047190_Glyma1 MGGATLPPGFRFHPTDEELVGYYLKRKVEGIEIELEVIPVIDLYKFDPWELPEKSFLPKR
                * *: *******:***********:*: **:*****:**::*****************:*

AT1G32510.1     DMEWFFFCHRDRKYQNGSRINRATKSGYWKATGKDRKIVCHSSSSSSSSSITGCRKTLVF
pt012227_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATQAGYWKATGKDRKVVCQS-------AVTGYRKTLVF
gm047190_Glyma1 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSN-----PSTVGYRKTLVF
                *:****** ***** **** ****::***********:**:*       : .* ******

AT1G32510.1     YMGRAPFGGRTEWVMHEYRLFDNDTSQGSLNFKGDFALCRVIKRNEHTLK----------
pt012227_POPTR_ YRGRAPLGDRTDWVMHEYRLCD-DLSQGSPNFKGAFALCRVVKKNEQGLKMSDPQGEPKA
gm047190_Glyma1 YLGRAPLGDRTDWVMHEYRLCD-DLGQATPCFQGGFALCRVIKKNEK-------------
                * ****:*.**:******** * * .*.:  *:* ******:*:**:             

AT1G32510.1     --------KCEIISPEVSDE------SLSNNVN-----------------NFCQASDLEK
pt012227_POPTR_ KKVGSSSSNVDFTSNVVSNEPSNISFGMSSQASYLYNNGNQYSTPIASPYQVTTVSELEP
gm047190_Glyma1 --------------------------AMSHSATL-----SRYSSPITSPYNVAPMGEFNQ
                                          .:* ...                 :.   .::: 

AT1G32510.1     GSCDASN--TRLSSPDFILESS-------------------------FQGNSHSKTEEDS
pt012227_POPTR_ AASLESNPPSHWISPELILDSSK---------------YEYPSSMNTWQPDTHGEFSPGS
gm047190_Glyma1 ASVETTNPSNFWISPDMILDSSKDYSQLQNAMAECFPRYDLPSVMAPWQSLEHPETSSSL
                .:   :*  .   **::**:**                         :*   * : . . 

AT1G32510.1     GFQVFTLPEFEYPLEVFAD---------------LNFDLEMEDPFMFDYH--------PE
pt012227_POPTR_ SYSNFT-GEIE-----HADDLSHIGFMSPYSEHGNYMGFGGNDDMHYQGY----------
gm047190_Glyma1 SYSNFN-GEVE-----FADNLSQIGCTRQW----NSMDLYGNGDVPYDGYDQVNSISYPE
                .:. *.  *.*     .**                 :.:  :. . :: :          

AT1G32510.1     PHMNNEVMSHHIRG
pt012227_POPTR_ --------------
gm047190_Glyma1 PF------------
BoxShade v3.31 C (beta, 970507) Output
AT1G32510.1     M V G S F L P P G F R F Y P T D E E L V G Y Y L H R R N E G L E I E L E I I P L M D L Y K F D P W E L P E K S F L P N R
pt012227_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L H R K V E G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
gm047190_Glyma1    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G I E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT1G32510.1     D M E W F F F C H R D R K Y Q N G S R I N R A T K S G Y W K A T G K D R K I V C H S S S S S S S S S I T G C R K T L V F
pt012227_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T Q A G Y W K A T G K D R K V V C Q S - - - - - - - A V T G Y R K T L V F
gm047190_Glyma1    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A T G K D R K V V C Q S N - - - - - P S T V G Y R K T L V F
 
AT1G32510.1     Y M G R A P F G G R T E W V M H E Y R L F D N D T S Q G S L N F K G D F A L C R V I K R N E H T L K - - - - - - - - - -
pt012227_POPTR_    Y R G R A P L G D R T D W V M H E Y R L C D - D L S Q G S P N F K G A F A L C R V V K K N E Q G L K M S D P Q G E P K A
gm047190_Glyma1    Y L G R A P L G D R T D W V M H E Y R L C D - D L G Q A T P C F Q G G F A L C R V I K K N E K - - - - - - - - - - - - -
 
AT1G32510.1     - - - - - - - - K C E I I S P E V S D E - - - - - - S L S N N V N - - - - - - - - - - - - - - - - - N F C Q A S D L E K
pt012227_POPTR_    K K V G S S S S N V D F T S N V V S N E P S N I S F G M S S Q A S Y L Y N N G N Q Y S T P I A S P Y Q V T T V S E L E P
gm047190_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - A M S H S A T L - - - - - S R Y S S P I T S P Y N V A P M G E F N Q
 
AT1G32510.1     G S C D A S N - - T R L S S P D F I L E S S - - - - - - - - - - - - - - - - - - - - - - - - - F Q G N S H S K T E E D S
pt012227_POPTR_    A A S L E S N P P S H W I S P E L I L D S S K - - - - - - - - - - - - - - - Y E Y P S S M N T W Q P D T H G E F S P G S
gm047190_Glyma1    A S V E T T N P S N F W I S P D M I L D S S K D Y S Q L Q N A M A E C F P R Y D L P S V M A P W Q S L E H P E T S S S L
 
AT1G32510.1     G F Q V F T L P E F E Y P L E V F A D - - - - - - - - - - - - - - - L N F D L E M E D P F M F D Y H - - - - - - - - P E
pt012227_POPTR_    S Y S N F T - G E I E - - - - - H A D D L S H I G F M S P Y S E H G N Y M G F G G N D D M H Y Q G Y - - - - - - - - - -
gm047190_Glyma1    S Y S N F N - G E V E - - - - - F A D N L S Q I G C T R Q W - - - - N S M D L Y G N G D V P Y D G Y D Q V N S I S Y P E
 
AT1G32510.1     P H M N N E V M S H H I R G
pt012227_POPTR_    - - - - - - - - - - - - - -
gm047190_Glyma1    P F - - - - - - - - - - - -
 
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