fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029346 not found in 442aa AT4G10350.1 1st_not 0.463678516 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G33280.1     --------------MSSSNGGVPPGFRFHPTD------EELLHYYLKKKISYEKFEMEVI
Sb029346_Sorbi1 YNIYTHIVNTKTSPNKSSSSYIYKLPRTHASSCTIVLARSRMHACMIYTCTLDRSCMFSI
                               .**.. :    * *.:.      .. :*  :  . : ::  *  *

AT1G33280.1     KEVDLNKIEPWDLQDRCKIGSTPQNEWYFFSHKDRKYPT--GSRTNRATH------SGFW
Sb029346_Sorbi1 AGVVIKFLPP----------VTPQIH----------LPTSLGAGTHGASHLLHRRTPAVA
                  * :: : *           *** .           **  *: *: *:*      ... 

AT1G33280.1     KATGRDKCIRNSYKKIGMRKTLV-FYKGR------------APHGQKTDWIMHEYRIEDT
Sb029346_Sorbi1 ETINRLPLLR------GCTGGLVPPFAGQLAATTVRGDAVAAADVQASTGVMLDRQAGEV
                :: .*   :*      *    **  : *:            *.. * :  :* : :  :.

AT1G33280.1     EDDPCEDGWVVCRVFKKKNLFKVGNDVGSNISN-NRLEARSFIRRESPYQGISMFELNK-
Sb029346_Sorbi1 VAGGA--GAVVDR----------GPVVGEEVLDLHVVRVRGGVRRR---RGLHLGVVGGC
                  . .  * ** *          *  **.:: : : :..*. :**.   :*: :  :.  

AT1G33280.1     --PEEISVH-QYPQPPMF-------QPHHK-PLSI---------GYDYSLALLPRESEYQ
Sb029346_Sorbi1 VVVVRVRVHVRHGGPGVVVVSAERRRRHGQVPASIRALAGAPFAAADLEEALLLEHA---
                    .: ** ::  * :.       : * : * **         . * . *** ..:   

AT1G33280.1     QACQPS-------GVEVGTCK-----------AVSEWGIVNCNMVSHEDSS--------R
Sb029346_Sorbi1 -AHHPSVLAGAALGV-VGVLKAILMHDPVGLLAVRGAAAVEDESLSHADLAVAGADALVP
                 * :**       ** **. *           **   . *: : :** * :         

AT1G33280.1     AMRFEDDGNNTSSTVQP---------------------PSNLLSLRG-------------
Sb029346_Sorbi1 ARGLPEAGGRGAVRPRPRRVLAVLVAEKVPLVLRRRPDPAPLLQLPGLDLVEVDFPDDLE
                *  : : *.. :   :*                     *: **.* *             

AT1G33280.1     ----ENGFL-----------------------GLF
Sb029346_Sorbi1 VELLESDLLLEVVQQQLLVGGVEPEARRHAVAG--
                    *..:*                       *
BoxShade v3.31 C (beta, 970507) Output
AT1G33280.1     - - - - - - - - - - - - - - M S S S N G G V P P G F R F H P T D - - - - - - E E L L H Y Y L K K K I S Y E K F E M E V I
Sb029346_Sorbi1    Y N I Y T H I V N T K T S P N K S S S S Y I Y K L P R T H A S S C T I V L A R S R M H A C M I Y T C T L D R S C M F S I
 
AT1G33280.1     K E V D L N K I E P W D L Q D R C K I G S T P Q N E W Y F F S H K D R K Y P T - - G S R T N R A T H - - - - - - S G F W
Sb029346_Sorbi1    A G V V I K F L P P - - - - - - - - - - V T P Q I H - - - - - - - - - - L P T S L G A G T H G A S H L L H R R T P A V A
 
AT1G33280.1     K A T G R D K C I R N S Y K K I G M R K T L V - F Y K G R - - - - - - - - - - - - A P H G Q K T D W I M H E Y R I E D T
Sb029346_Sorbi1    E T I N R L P L L R - - - - - - G C T G G L V P P F A G Q L A A T T V R G D A V A A A D V Q A S T G V M L D R Q A G E V
 
AT1G33280.1     E D D P C E D G W V V C R V F K K K N L F K V G N D V G S N I S N - N R L E A R S F I R R E S P Y Q G I S M F E L N K -
Sb029346_Sorbi1    V A G G A - - G A V V D R - - - - - - - - - - G P V V G E E V L D L H V V R V R G G V R R R - - - R G L H L G V V G G C
 
AT1G33280.1     - - P E E I S V H - Q Y P Q P P M F - - - - - - - Q P H H K - P L S I - - - - - - - - - G Y D Y S L A L L P R E S E Y Q
Sb029346_Sorbi1    V V V V R V R V H V R H G G P G V V V V S A E R R R R H G Q V P A S I R A L A G A P F A A A D L E E A L L L E H A - - -
 
AT1G33280.1     Q A C Q P S - - - - - - - G V E V G T C K - - - - - - - - - - - A V S E W G I V N C N M V S H E D S S - - - - - - - - R
Sb029346_Sorbi1    - A H H P S V L A G A A L G V - V G V L K A I L M H D P V G L L A V R G A A A V E D E S L S H A D L A V A G A D A L V P
 
AT1G33280.1     A M R F E D D G N N T S S T V Q P - - - - - - - - - - - - - - - - - - - - - P S N L L S L R G - - - - - - - - - - - - -
Sb029346_Sorbi1    A R G L P E A G G R G A V R P R P R R V L A V L V A E K V P L V L R R R P D P A P L L Q L P G L D L V E V D F P D D L E
 
AT1G33280.1     - - - - E N G F L - - - - - - - - - - - - - - - - - - - - - - - G L F
Sb029346_Sorbi1    V E L L E S D L L L E V V Q Q Q L L V G G V E P E A R R H A V A G - -
 
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