fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025772 not found in 358aa AT4G10350.1 1st_not 0.548686244 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G33280.1     -MSSSNGGVPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKI
gm025772_Glyma0 MGSSTNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRI
                  **:*************************:*::**:*:**:******:******:**:*

AT1G33280.1     GSTPQNEWYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKG
gm025772_Glyma0 GSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYKG
                ****************************::***************:**************

AT1G33280.1     RAPHGQKTDWIMHEYRIEDTED---DPCEDGWVVCRVFKKKNLFKVGNDVGS--------
gm025772_Glyma0 RAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIENEGGSTHKPDHQI
                ****************:** :*   .. *****************: *: **        

AT1G33280.1     -NISNNRLEARSFIRRESPY--------QGISMFELNKPEEISVHQYPQP----------
gm025772_Glyma0 NNSSNT--NARSY--RENHYLLHQQQNPRNSSGLELDKP-ELALH-YPPPHLQNPPYSLF
                 * **.  :***:  **. *        :. * :**:** *:::* ** *          

AT1G33280.1     ---PMFQPHHKPLSIGYDYS---------LALLPRESE-------YQQACQPSGVEVGTC
gm025772_Glyma0 QSQPLLQT-QKPMVYDYSYTSDTPIMAKQLMTNPRDCESGSDGLRYQ--VSESGMEVGSC
                   *::*. :**:  .*.*:         *   **:.*       **   . **:***:*

AT1G33280.1     -----------KAVSEWGIVNCNMVSH----EDSSRAMRFEDDGNNTSSTVQPPSNLLSL
gm025772_Glyma0 EPNQEMGTGRGEGINEWGVLDRLVTSHLAGNEDSSKGVRFEE--ANPQSVHQ--INQLSL
                           :.:.***:::  :.**    ****:.:***:   *..*. *   * ***

AT1G33280.1     RGENGFLGLF-
gm025772_Glyma0 RGEMDFWAYGK
                *** .* .
BoxShade v3.31 C (beta, 970507) Output
AT1G33280.1     - M S S S N G G V P P G F R F H P T D E E L L H Y Y L K K K I S Y E K F E M E V I K E V D L N K I E P W D L Q D R C K I
gm025772_Glyma0    M G S S T N G G V P P G F R F H P T D E E L L H Y Y L K K K V S F Q K F D M D V I R E V D L N K M E P W D L Q E R C R I
 
AT1G33280.1     G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T H S G F W K A T G R D K C I R N S Y K K I G M R K T L V F Y K G
gm025772_Glyma0    G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T N A G F W K A T G R D K C I R N S F K K I G M R K T L V F Y K G
 
AT1G33280.1     R A P H G Q K T D W I M H E Y R I E D T E D - - - D P C E D G W V V C R V F K K K N L F K V G N D V G S - - - - - - - -
gm025772_Glyma0    R A P H G Q K T D W I M H E Y R L E D G N D P Q G S A N E D G W V V C R V F K K K N L F K I E N E G G S T H K P D H Q I
 
AT1G33280.1     - N I S N N R L E A R S F I R R E S P Y - - - - - - - - Q G I S M F E L N K P E E I S V H Q Y P Q P - - - - - - - - - -
gm025772_Glyma0    N N S S N T - - N A R S Y - - R E N H Y L L H Q Q Q N P R N S S G L E L D K P - E L A L H - Y P P P H L Q N P P Y S L F
 
AT1G33280.1     - - - P M F Q P H H K P L S I G Y D Y S - - - - - - - - - L A L L P R E S E - - - - - - - Y Q Q A C Q P S G V E V G T C
gm025772_Glyma0    Q S Q P L L Q T - Q K P M V Y D Y S Y T S D T P I M A K Q L M T N P R D C E S G S D G L R Y Q - - V S E S G M E V G S C
 
AT1G33280.1     - - - - - - - - - - - K A V S E W G I V N C N M V S H - - - - E D S S R A M R F E D D G N N T S S T V Q P P S N L L S L
gm025772_Glyma0    E P N Q E M G T G R G E G I N E W G V L D R L V T S H L A G N E D S S K G V R F E E - - A N P Q S V H Q - - I N Q L S L
 
AT1G33280.1     R G E N G F L G L F -
gm025772_Glyma0    R G E M D F W A Y G K
 
0