fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013233 not found in 175aa AT1G71450.1 not_not 0.420168067 III
Pt028408 not found in 180aa AT1G71450.1 not_not 0.420168067 III
Pt014630 not found in 180aa AT1G71450.1 not_not 0.417366946 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G33760.1     ME--NT---YVGQRDYRFNVNQLSYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMA
pt028408_POPTR_ MEGRNSTAHHGGIAS--------SYTGVRKRKWGKWVSEIREPEKKTRIWLGSFETPEMA
pt013233_POPTR_ MEERNT----GGVSS--------SYRGVRKRKWGKWVSEIREPGKKNRIWLGSFETPEMA
pt014630_POPTR_ MEERNTAS-HGGMSS--------SYRGVRKRKWGKWVSEIREPGKKSRIWLGSFETPEMA
                **  *:     *  .        ** *:*:************* **.******:**.***

AT1G33760.1     AAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALE
pt028408_POPTR_ AAAYDVAALHFRGCEAKLNFPELAGKLPMPASSSADHIRMAAHQAAVSLRPS-----TVD
pt013233_POPTR_ AAAYDVAALHFRGHDARVNFPDLVHDLPKPTSSSSEDIRMAAHEAAMSLRPF-----TAE
pt014630_POPTR_ ATAYDVAALHFRGYDAKLNFPDLVHSLPKPASSDAEDIRIAAHEAAMSLRPS-----TVE
                *:***.****:**  :.:***:*. .:* * **.::.*: **::**: ::*      : :

AT1G33760.1     SGQG---LSRVG-----LSPDQIQAINESPLDSPRMGWMQDLEVADYEELYGQFFGQHD-
pt028408_POPTR_ SSQGGSSSSNVGPITVRLSPSQIQAIHESPLDSPKM-WMQMAEIATLEE-SSMMFSD-DI
pt013233_POPTR_ SSHGGSSTSNVGPITVRLSASQIQAINESPLDSPKM-WMHMSEIAILEE--SMVFSN-NI
pt014630_POPTR_ SSQGGSSSSNVGPITVRLSPSQIQAINESPLDSPKM-WMQMSGIAMPDE--SMIYSSIDV
                *.:*    *.**     **..*****:*******:* **:   :*  :*  . .:.. : 

AT1G33760.1     -RDEFFEMQQFQSIWNSNN
pt028408_POPTR_ -EDDEWDNNQTDSLWGP--
pt013233_POPTR_ -EEDEWDNKQTYSLWDP--
pt014630_POPTR_ GEEEEWDNKQTDSLWDP--
                 .:: :: :*  *:*..
BoxShade v3.31 C (beta, 970507) Output
AT1G33760.1     M E - - N T - - - Y V G Q R D Y R F N V N Q L S Y R G I R R R K W G K W V S E I R E P G K K T R I W L G S Y E T A E M A
pt028408_POPTR_    M E G R N S T A H H G G I A S - - - - - - - - S Y T G V R K R K W G K W V S E I R E P E K K T R I W L G S F E T P E M A
pt013233_POPTR_    M E E R N T - - - - G G V S S - - - - - - - - S Y R G V R K R K W G K W V S E I R E P G K K N R I W L G S F E T P E M A
pt014630_POPTR_    M E E R N T A S - H G G M S S - - - - - - - - S Y R G V R K R K W G K W V S E I R E P G K K S R I W L G S F E T P E M A
 
AT1G33760.1     A A A Y D A A A L H L R G R G T N L N F P E L V D S F P R P E S S S S E H I Q A A A Q D A A L M F K P G R L S E P A L E
pt028408_POPTR_    A A A Y D V A A L H F R G C E A K L N F P E L A G K L P M P A S S S A D H I R M A A H Q A A V S L R P S - - - - - T V D
pt013233_POPTR_    A A A Y D V A A L H F R G H D A R V N F P D L V H D L P K P T S S S S E D I R M A A H E A A M S L R P F - - - - - T A E
pt014630_POPTR_    A T A Y D V A A L H F R G Y D A K L N F P D L V H S L P K P A S S D A E D I R I A A H E A A M S L R P S - - - - - T V E
 
AT1G33760.1     S G Q G - - - L S R V G - - - - - L S P D Q I Q A I N E S P L D S P R M G W M Q D L E V A D Y E E L Y G Q F F G Q H D -
pt028408_POPTR_    S S Q G G S S S S N V G P I T V R L S P S Q I Q A I H E S P L D S P K M - W M Q M A E I A T L E E - S S M M F S D - D I
pt013233_POPTR_    S S H G G S S T S N V G P I T V R L S A S Q I Q A I N E S P L D S P K M - W M H M S E I A I L E E - - S M V F S N - N I
pt014630_POPTR_    S S Q G G S S S S N V G P I T V R L S P S Q I Q A I N E S P L D S P K M - W M Q M S G I A M P D E - - S M I Y S S I D V
 
AT1G33760.1     - R D E F F E M Q Q F Q S I W N S N N
pt028408_POPTR_    - E D D E W D N N Q T D S L W G P - -
pt013233_POPTR_    - E E D E W D N K Q T Y S L W D P - -
pt014630_POPTR_    G E E E E W D N K Q T D S L W D P - -
 
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