fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002384 not found in 213aa AT1G33760.1 1st_1st 0.434173669 Ia
Pt013002 not found in 185aa AT1G33760.1 1st_1st 0.476190476 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G33760.1     ------MENTYVGQRDYRFNVNQ------LSYRGIRRRKWGKWVSEIREPGKKTRIWLGS
gm002384_Glyma0 MDQETTRRNTM---QECHV-IAPTTTTATSSYRGVRQRKWGKWVSEIREPGKKSRIWLGS
pt013002_POPTR_ ------MEGRI---RDGHLGISP------PRYRGVRQRKWGKWVSEIREPGKKTRIWLGS
                       ..     :: :. :          ***:*:****************:******

AT1G33760.1     YETAEMAAAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAALMFK---
gm002384_Glyma0 YESPEMAAAAYDVAALHLRGRAARLNFPELVETLPRPTSSKPEDVQVAAQQAAVMFRISP
pt013002_POPTR_ YEIPEMAAAAYDVAALHLRGRGAQLNFPEMVDILPQPASSSAEDVQMAAQEAALMFR---
                ** .********.********.:.*****:*: :*:* **..*.:* ***:**:**:   

AT1G33760.1     ---PGRLSEPA------LESGQGLSRVGLSPDQIQAINESPLDSPRMGWMQDLEVA----
gm002384_Glyma0 TMSPINNHQGCVNDNNIIKGSVVPVRVGLSPTQIQAINESPLDSPKM-WMVQMAEALRFG
pt013002_POPTR_ --RPMKCSEAVSGDSS-VGGGLGPVRVGLSPSQIQAINEAPLDSPKM-WM-ELAGALLL-
                   * .  :        : ..    ****** *******:*****:* ** ::  *    

AT1G33760.1     --DYEELYGQFFGQHDRDEFFEMQ-----QFQSIWNSNN--
gm002384_Glyma0 FDDHSMMML---PSDDDDYALELSGWEEIQHESLWDSPEYM
pt013002_POPTR_ --EEPMIM-----SDDIDVAYR-DEWGEMQHDSIWDY----
                  :   :      ..* *   . .     *.:*:*:
BoxShade v3.31 C (beta, 970507) Output
AT1G33760.1     - - - - - - M E N T Y V G Q R D Y R F N V N Q - - - - - - L S Y R G I R R R K W G K W V S E I R E P G K K T R I W L G S
gm002384_Glyma0    M D Q E T T R R N T M - - - Q E C H V - I A P T T T T A T S S Y R G V R Q R K W G K W V S E I R E P G K K S R I W L G S
pt013002_POPTR_    - - - - - - M E G R I - - - R D G H L G I S P - - - - - - P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S
 
AT1G33760.1     Y E T A E M A A A A Y D A A A L H L R G R G T N L N F P E L V D S F P R P E S S S S E H I Q A A A Q D A A L M F K - - -
gm002384_Glyma0    Y E S P E M A A A A Y D V A A L H L R G R A A R L N F P E L V E T L P R P T S S K P E D V Q V A A Q Q A A V M F R I S P
pt013002_POPTR_    Y E I P E M A A A A Y D V A A L H L R G R G A Q L N F P E M V D I L P Q P A S S S A E D V Q M A A Q E A A L M F R - - -
 
AT1G33760.1     - - - P G R L S E P A - - - - - - L E S G Q G L S R V G L S P D Q I Q A I N E S P L D S P R M G W M Q D L E V A - - - -
gm002384_Glyma0    T M S P I N N H Q G C V N D N N I I K G S V V P V R V G L S P T Q I Q A I N E S P L D S P K M - W M V Q M A E A L R F G
pt013002_POPTR_    - - R P M K C S E A V S G D S S - V G G G L G P V R V G L S P S Q I Q A I N E A P L D S P K M - W M - E L A G A L L L -
 
AT1G33760.1     - - D Y E E L Y G Q F F G Q H D R D E F F E M Q - - - - - Q F Q S I W N S N N - -
gm002384_Glyma0    F D D H S M M M L - - - P S D D D D Y A L E L S G W E E I Q H E S L W D S P E Y M
pt013002_POPTR_    - - E E P M I M - - - - - S D D I D V A Y R - D E W G E M Q H D S I W D Y - - - -
 
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