fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013002 not found in 185aa AT1G33760.1 1st_1st 0.476190476 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G33760.1     MENTYVGQRDYRFNVNQLSYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYD
pt013002_POPTR_ MEGRI---RDGHLGISPPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIPEMAAAAYD
                **.     ** ::.:.   ***:*:************************* .********

AT1G33760.1     AAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAALMF-KPGRLSE-----PAL
pt013002_POPTR_ VAALHLRGRGAQLNFPEMVDILPQPASSSAEDVQMAAQEAALMFRRPMKCSEAVSGDSSV
                .*********::*****:** :*:* ***:*.:* ***:***** :* : **     .::

AT1G33760.1     ESGQGLSRVGLSPDQIQAINESPLDSPRMGWMQ---------------DLEVADYEELYG
pt013002_POPTR_ GGGLGPVRVGLSPSQIQAINEAPLDSPKM-WMELAGALLLEEPMIMSDDIDVA-----Y-
                 .* *  ******.*******:*****:* **:               *::**     * 

AT1G33760.1     QFFGQHDRDEFFEMQQFQSIWNSNN
pt013002_POPTR_ -------RDEWGEMQH-DSIWDY--
                       ***: ***: :***:
BoxShade v3.31 C (beta, 970507) Output
AT1G33760.1     M E N T Y V G Q R D Y R F N V N Q L S Y R G I R R R K W G K W V S E I R E P G K K T R I W L G S Y E T A E M A A A A Y D
pt013002_POPTR_    M E G R I - - - R D G H L G I S P P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E I P E M A A A A Y D
 
AT1G33760.1     A A A L H L R G R G T N L N F P E L V D S F P R P E S S S S E H I Q A A A Q D A A L M F - K P G R L S E - - - - - P A L
pt013002_POPTR_    V A A L H L R G R G A Q L N F P E M V D I L P Q P A S S S A E D V Q M A A Q E A A L M F R R P M K C S E A V S G D S S V
 
AT1G33760.1     E S G Q G L S R V G L S P D Q I Q A I N E S P L D S P R M G W M Q - - - - - - - - - - - - - - - D L E V A D Y E E L Y G
pt013002_POPTR_    G G G L G P V R V G L S P S Q I Q A I N E A P L D S P K M - W M E L A G A L L L E E P M I M S D D I D V A - - - - - Y -
 
AT1G33760.1     Q F F G Q H D R D E F F E M Q Q F Q S I W N S N N
pt013002_POPTR_    - - - - - - - R D E W G E M Q H - D S I W D Y - -
 
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