fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013002 not found in 185aa AT1G33760.1 1st_1st 0.476190476 Ia
Pt015543 not found in 188aa AT1G33760.1 not_1st 0.473389355 II
Pt011329 not found in 189aa AT1G33760.1 not_1st 0.431372549 II
Pt013233 not found in 175aa AT1G71450.1 not_not 0.420168067 III
Pt028408 not found in 180aa AT1G71450.1 not_not 0.420168067 III
Pt014630 not found in 180aa AT1G71450.1 not_not 0.417366946 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G33760.1     MENT-----YVGQRDYRFNVNQLSYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMA
pt013233_POPTR_ MEERNT----GG-------VSS-SYRGVRKRKWGKWVSEIREPGKKNRIWLGSFETPEMA
pt028408_POPTR_ MEGRNSTAHHGG-------IAS-SYTGVRKRKWGKWVSEIREPEKKTRIWLGSFETPEMA
pt011329_POPTR_ MEGRSRDA-HGDQ------ISTPRYRGIRQRKWGTWVSEIREPGQKTRIWLGSYEKPEMA
pt013002_POPTR_ MEGRIRDG-HLG-------ISPPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIPEMA
pt015543_POPTR_ MEGRTRDG-HPG-------ISQPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEMPEMA
pt014630_POPTR_ MEERNTAS-HGG-------MSS-SYRGVRKRKWGKWVSEIREPGKKSRIWLGSFETPEMA
                **         .       :    * *:*:****.******** :*.******:* .***

AT1G33760.1     AAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAALMFKP---------
pt013233_POPTR_ AAAYDVAALHFRGHDARVNFPDLVHDLPKPTSSSSEDIRMAAHEAAMSLRPFTAESSHG-
pt028408_POPTR_ AAAYDVAALHFRGCEAKLNFPELAGKLPMPASSSADHIRMAAHQAAVSLRPSTVDSSQG-
pt011329_POPTR_ AVAYDVAALHLRGRGAQLNFPEMEDSLPRPASSRAEDVQAAAREAALLFSTGPVKCSDIV
pt013002_POPTR_ AAAYDVAALHLRGRGAQLNFPEMVDILPQPASSSAEDVQMAAQEAALMFRR-PMKCSEAV
pt015543_POPTR_ AAAYDVAALHLRGRGAQLNFPEMVDSLPRPASSSTEDVQMAAQEAALLFRR-PIKCSEGV
pt014630_POPTR_ ATAYDVAALHFRGYDAKLNFPDLVHSLPKPASSDAEDIRIAAHEAAMSLRPSTVESSQG-
                *.***.****:**  :.:***::   :* * ** ::.:: **::**: :           

AT1G33760.1     --GRLSEPALESG-QGLSRVGLSPDQIQAINESPLDSPRMGWMQ-DLEVADYEE--LYGQ
pt013233_POPTR_ --GSSTSN------VGPITVRLSASQIQAINESPLDSPKM-WMH-MSEIAILEE-SMVFS
pt028408_POPTR_ --GSSSSN------VGPITVRLSPSQIQAIHESPLDSPKM-WMQ-MAEIATLEESSMMFS
pt011329_POPTR_ SCGSITSDG---G-FGPVRVGLSPSQIQAINEAPLDSPKM-WTEYLAESLLTGEPMAMEN
pt013002_POPTR_ S-GDSSVGG---G-LGPVRVGLSPSQIQAINEAPLDSPKM-WME-LAGALLLEEPMIMSD
pt015543_POPTR_ S-GSSSGGG---GSLGPVRVGLSPSQIQAINEAPLDSPKM-WME-LAGALLLDEPVAMGD
pt014630_POPTR_ --GSSSSN------VGPITVRLSPSQIQAINESPLDSPKM-WMQ-MSGIAMPDE-SMIYS
                  *  :         *   * **..*****:*:*****:* * .         *     .

AT1G33760.1     FFGQHDRDEFFEMQ-QFQSIWNSNN
pt013233_POPTR_ N-NI-EEDEWDNK--QTYSLWDP--
pt028408_POPTR_ D-DI-EDDEWDNN--QTDSLWGP--
pt011329_POPTR_ DIGVGYS-EWEEI--QQESIWGYY-
pt013002_POPTR_ DIDVAYRDEWGEM--QHDSIWDY--
pt015543_POPTR_ DIDVELSDEWGEMEHEHDSIWDY--
pt014630_POPTR_ SIDVGEEEEWDNK--QTDSLWDP--
                  .     *: :   :  *:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G33760.1     M E N T - - - - - Y V G Q R D Y R F N V N Q L S Y R G I R R R K W G K W V S E I R E P G K K T R I W L G S Y E T A E M A
pt013233_POPTR_    M E E R N T - - - - G G - - - - - - - V S S - S Y R G V R K R K W G K W V S E I R E P G K K N R I W L G S F E T P E M A
pt028408_POPTR_    M E G R N S T A H H G G - - - - - - - I A S - S Y T G V R K R K W G K W V S E I R E P E K K T R I W L G S F E T P E M A
pt011329_POPTR_    M E G R S R D A - H G D Q - - - - - - I S T P R Y R G I R Q R K W G T W V S E I R E P G Q K T R I W L G S Y E K P E M A
pt013002_POPTR_    M E G R I R D G - H L G - - - - - - - I S P P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E I P E M A
pt015543_POPTR_    M E G R T R D G - H P G - - - - - - - I S Q P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E M P E M A
pt014630_POPTR_    M E E R N T A S - H G G - - - - - - - M S S - S Y R G V R K R K W G K W V S E I R E P G K K S R I W L G S F E T P E M A
 
AT1G33760.1     A A A Y D A A A L H L R G R G T N L N F P E L V D S F P R P E S S S S E H I Q A A A Q D A A L M F K P - - - - - - - - -
pt013233_POPTR_    A A A Y D V A A L H F R G H D A R V N F P D L V H D L P K P T S S S S E D I R M A A H E A A M S L R P F T A E S S H G -
pt028408_POPTR_    A A A Y D V A A L H F R G C E A K L N F P E L A G K L P M P A S S S A D H I R M A A H Q A A V S L R P S T V D S S Q G -
pt011329_POPTR_    A V A Y D V A A L H L R G R G A Q L N F P E M E D S L P R P A S S R A E D V Q A A A R E A A L L F S T G P V K C S D I V
pt013002_POPTR_    A A A Y D V A A L H L R G R G A Q L N F P E M V D I L P Q P A S S S A E D V Q M A A Q E A A L M F R R - P M K C S E A V
pt015543_POPTR_    A A A Y D V A A L H L R G R G A Q L N F P E M V D S L P R P A S S S T E D V Q M A A Q E A A L L F R R - P I K C S E G V
pt014630_POPTR_    A T A Y D V A A L H F R G Y D A K L N F P D L V H S L P K P A S S D A E D I R I A A H E A A M S L R P S T V E S S Q G -
 
AT1G33760.1     - - G R L S E P A L E S G - Q G L S R V G L S P D Q I Q A I N E S P L D S P R M G W M Q - D L E V A D Y E E - - L Y G Q
pt013233_POPTR_    - - G S S T S N - - - - - - V G P I T V R L S A S Q I Q A I N E S P L D S P K M - W M H - M S E I A I L E E - S M V F S
pt028408_POPTR_    - - G S S S S N - - - - - - V G P I T V R L S P S Q I Q A I H E S P L D S P K M - W M Q - M A E I A T L E E S S M M F S
pt011329_POPTR_    S C G S I T S D G - - - G - F G P V R V G L S P S Q I Q A I N E A P L D S P K M - W T E Y L A E S L L T G E P M A M E N
pt013002_POPTR_    S - G D S S V G G - - - G - L G P V R V G L S P S Q I Q A I N E A P L D S P K M - W M E - L A G A L L L E E P M I M S D
pt015543_POPTR_    S - G S S S G G G - - - G S L G P V R V G L S P S Q I Q A I N E A P L D S P K M - W M E - L A G A L L L D E P V A M G D
pt014630_POPTR_    - - G S S S S N - - - - - - V G P I T V R L S P S Q I Q A I N E S P L D S P K M - W M Q - M S G I A M P D E - S M I Y S
 
AT1G33760.1     F F G Q H D R D E F F E M Q - Q F Q S I W N S N N
pt013233_POPTR_    N - N I - E E D E W D N K - - Q T Y S L W D P - -
pt028408_POPTR_    D - D I - E D D E W D N N - - Q T D S L W G P - -
pt011329_POPTR_    D I G V G Y S - E W E E I - - Q Q E S I W G Y Y -
pt013002_POPTR_    D I D V A Y R D E W G E M - - Q H D S I W D Y - -
pt015543_POPTR_    D I D V E L S D E W G E M E H E H D S I W D Y - -
pt014630_POPTR_    S I D V G E E E E W D N K - - Q T D S L W D P - -
 
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