fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G33760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002384 not found in 213aa AT1G33760.1 1st_1st 0.434173669 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G33760.1     MENTYVGQRDYRFNVNQ-------------LSYRGIRRRKWGKWVSEIREPGKKTRIWLG
gm002384_Glyma0 -----MDQETTRRNTMQECHVIAPTTTTATSSYRGVRQRKWGKWVSEIREPGKKSRIWLG
                     :.*.  * *. *              ****:*:****************:*****

AT1G33760.1     SYETAEMAAAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAALMFKPG
gm002384_Glyma0 SYESPEMAAAAYDVAALHLRGRAARLNFPELVETLPRPTSSKPEDVQVAAQQAAVMFRIS
                ***:.********.********.:.*******:::*** **..*.:*.***:**:**: .

AT1G33760.1     RLSEPALESGQGL-------------SRVGLSPDQIQAINESPLDSPRMGWMQDLEVADY
gm002384_Glyma0 PTMSP-INNHQGCVNDNNIIKGSVVPVRVGLSPTQIQAINESPLDSPKM-WMVQMA----
                   .* ::. **               ****** *************:* ** ::     

AT1G33760.1     EEL-YGQFFGQH-------DRDEF------FEMQQFQSIWNSNN--
gm002384_Glyma0 EALRFG--FDDHSMMMLPSDDDDYALELSGWEEIQHESLWDSPEYM
                * * :*  *.:*       * *::      :*  *.:*:*:* :
BoxShade v3.31 C (beta, 970507) Output
AT1G33760.1     M E N T Y V G Q R D Y R F N V N Q - - - - - - - - - - - - - L S Y R G I R R R K W G K W V S E I R E P G K K T R I W L G
gm002384_Glyma0    - - - - - M D Q E T T R R N T M Q E C H V I A P T T T T A T S S Y R G V R Q R K W G K W V S E I R E P G K K S R I W L G
 
AT1G33760.1     S Y E T A E M A A A A Y D A A A L H L R G R G T N L N F P E L V D S F P R P E S S S S E H I Q A A A Q D A A L M F K P G
gm002384_Glyma0    S Y E S P E M A A A A Y D V A A L H L R G R A A R L N F P E L V E T L P R P T S S K P E D V Q V A A Q Q A A V M F R I S
 
AT1G33760.1     R L S E P A L E S G Q G L - - - - - - - - - - - - - S R V G L S P D Q I Q A I N E S P L D S P R M G W M Q D L E V A D Y
gm002384_Glyma0    P T M S P - I N N H Q G C V N D N N I I K G S V V P V R V G L S P T Q I Q A I N E S P L D S P K M - W M V Q M A - - - -
 
AT1G33760.1     E E L - Y G Q F F G Q H - - - - - - - D R D E F - - - - - - F E M Q Q F Q S I W N S N N - -
gm002384_Glyma0    E A L R F G - - F D D H S M M M L P S D D D D Y A L E L S G W E E I Q H E S L W D S P E Y M
 
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