fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G34790.1 NLNSNLDLNPNPLYAEE at 56/303 in AT1G34790.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp013471 not found in 444aa AT3G57670.1 not_not 0.512237762 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G34790.1     ----------------------------------------MESPPLYEI-----------
pp013471_Pp1s35 MSFKGAKKFVIRFSATATDSGSAVAGVGKYSGSRVLFSSYTNGPELSHLLERNSTLSELD
                                                         :.* * .:           

AT1G34790.1     ----------SSSSSSE--------------------KPRHHFQSLDLFP----------
pp013471_Pp1s35 IDTVENSKDDSATMSSRYNPQSSVAVAHPILTFCEWLKPSQPGQSLPHYPVAIPCESLYP
                          *:: **.                    ** :  ***  :*          

AT1G34790.1     -NLNQNSCIN----------------------------------------NTLIEPLPLI
pp013471_Pp1s35 GSASGSSCESYFPAQPRSSNPIHRRQLQAQFYNQQARDEHEWRQQRHLQKDVSSEPLPFL
                 . . .** .                                        :.  ****::

AT1G34790.1     DRINLNSNLDL-NPNPLYAEEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKR
pp013471_Pp1s35 SLSPPTGNDDLSDPALRTAILLPEASHASEESDENVTVALHI-----GPPSSDAMSM-SR
                .    ..* ** :*    *    : .. .**.*.:* * ***     * **.** .: .*

AT1G34790.1     NGKEIATYDAGKGIENE--------LSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNN
pp013471_Pp1s35 STESPSVYDSLSLVERERLQRGQSRLHEGQYWIPTPAQILVGPTQFSCPVCNKTFNRYNN
                . :. :.**: . :*.*        *    ****:* ***:* *:*** ** ********

AT1G34790.1     LQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTH
pp013471_Pp1s35 MQMHMWGHGSQYRKGPESLRGTQPTAMLRLACYCCSPGCRNNIDHPRSKPLKDFRTLQTH
                :******************:**** *** :.****  ****:******************

AT1G34790.1     YKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSG
pp013471_Pp1s35 YKRKHGIKPFMCRKCSKAFAVRGDWRTHEKNCGKLWFCTCGSDFKHKRSLKDHIRAFGNG
                ****** *** ** *.* :**:************ *.*.**************::***.*

AT1G34790.1     HGPYPTGLFE-------EQASNSSVSETLFF
pp013471_Pp1s35 HAAHGIDSCEDDEDPVSEEDGDEEVSGGSH-
                *..:  .  *       *: .:..**   .
BoxShade v3.31 C (beta, 970507) Output
AT1G34790.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S P P L Y E I - - - - - - - - - - -
pp013471_Pp1s35    M S F K G A K K F V I R F S A T A T D S G S A V A G V G K Y S G S R V L F S S Y T N G P E L S H L L E R N S T L S E L D
 
AT1G34790.1     - - - - - - - - - - S S S S S S E - - - - - - - - - - - - - - - - - - - - K P R H H F Q S L D L F P - - - - - - - - - -
pp013471_Pp1s35    I D T V E N S K D D S A T M S S R Y N P Q S S V A V A H P I L T F C E W L K P S Q P G Q S L P H Y P V A I P C E S L Y P
 
AT1G34790.1     - N L N Q N S C I N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N T L I E P L P L I
pp013471_Pp1s35    G S A S G S S C E S Y F P A Q P R S S N P I H R R Q L Q A Q F Y N Q Q A R D E H E W R Q Q R H L Q K D V S S E P L P F L
 
AT1G34790.1     D R I N L N S N L D L - N P N P L Y A E E G E Q E E E E E E E E D R E V D V D L H I G L P G F G K P S N D A K Q L K K R
pp013471_Pp1s35    S L S P P T G N D D L S D P A L R T A I L L P E A S H A S E E S D E N V T V A L H I - - - - - G P P S S D A M S M - S R
 
AT1G34790.1     N G K E I A T Y D A G K G I E N E - - - - - - - - L S G K A Y W I P A P E Q I L I G F T H F S C H V C F K T F N R Y N N
pp013471_Pp1s35    S T E S P S V Y D S L S L V E R E R L Q R G Q S R L H E G Q Y W I P T P A Q I L V G P T Q F S C P V C N K T F N R Y N N
 
AT1G34790.1     L Q M H M W G H G S Q Y R K G P E S L K G T Q P R A M L G I P C Y C C V E G C R N H I D H P R S K P L K D F R T L Q T H
pp013471_Pp1s35    M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L R L A C Y C C S P G C R N N I D H P R S K P L K D F R T L Q T H
 
AT1G34790.1     Y K R K H G H K P F S C R L C G K L L A V K G D W R T H E K N C G K R W V C V C G S D F K H K R S L K D H V K A F G S G
pp013471_Pp1s35    Y K R K H G I K P F M C R K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D F K H K R S L K D H I R A F G N G
 
AT1G34790.1     H G P Y P T G L F E - - - - - - - E Q A S N S S V S E T L F F
pp013471_Pp1s35    H A A H G I D S C E D D E D P V S E E D G D E E V S G G S H -
 
0