fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G34790.1 NLNSNLDLNPNPLYAEE at 56/303 in AT1G34790.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037767 not found in 273aa AT1G34790.1 1st_1st 0.564685314 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G34790.1     MESPPLYEISSSS----SSEKPRHHFQSLDLFPNLNQNSCINNTLIEPLPLIDRINLNSN
pt037767_POPTR_ MEPS---EISINSCLIASSSTNHNDIEPLDLFPGTSHSS------RGPIPFL------SS
                **..   *** .*    **.. ::.::.*****. .:.*        *:*::      *.

AT1G34790.1     LDLNPNPLYAEEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYD
pt037767_POPTR_ LINSPEAPFSE--NPKAIGDEDMDADVTMALRIGLPDYSGYSSINQNV------------
                *  .*:. ::*  : :   :*: * :* : *:****.:.  *.  :::            

AT1G34790.1     AGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPE
pt037767_POPTR_ --KGNVN-VTAKQYWIPTPEQILIGFTHFSCHVCFKTFNRYNNLQMHLWGHGSQYRRGHE
                  **  * ::.* ****:*****************************:********:* *

AT1G34790.1     SLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGK
pt037767_POPTR_ SLKGTQPRAMTGIPCFCCAEGCKNNIEHPRAKPLKDFRTLQTHYKRKHGLKPFMCRKCGK
                ********** ****:**.***:*:*:***:****************** *** ** ***

AT1G34790.1     LLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGL----FEEQA
pt037767_POPTR_ FLAVKGDWRTHEKNCGKRWLCVCGSDFKHKRSLKDHIKSFGLGHGPFPPSFDGVELLDDA
                :******************:****************:*:** ****:*..:    : ::*

AT1G34790.1     SNSSVSETLFF
pt037767_POPTR_ SSLPI------
                *. .:
BoxShade v3.31 C (beta, 970507) Output
AT1G34790.1     M E S P P L Y E I S S S S - - - - S S E K P R H H F Q S L D L F P N L N Q N S C I N N T L I E P L P L I D R I N L N S N
pt037767_POPTR_    M E P S - - - E I S I N S C L I A S S S T N H N D I E P L D L F P G T S H S S - - - - - - R G P I P F L - - - - - - S S
 
AT1G34790.1     L D L N P N P L Y A E E G E Q E E E E E E E E D R E V D V D L H I G L P G F G K P S N D A K Q L K K R N G K E I A T Y D
pt037767_POPTR_    L I N S P E A P F S E - - N P K A I G D E D M D A D V T M A L R I G L P D Y S G Y S S I N Q N V - - - - - - - - - - - -
 
AT1G34790.1     A G K G I E N E L S G K A Y W I P A P E Q I L I G F T H F S C H V C F K T F N R Y N N L Q M H M W G H G S Q Y R K G P E
pt037767_POPTR_    - - K G N V N - V T A K Q Y W I P T P E Q I L I G F T H F S C H V C F K T F N R Y N N L Q M H L W G H G S Q Y R R G H E
 
AT1G34790.1     S L K G T Q P R A M L G I P C Y C C V E G C R N H I D H P R S K P L K D F R T L Q T H Y K R K H G H K P F S C R L C G K
pt037767_POPTR_    S L K G T Q P R A M T G I P C F C C A E G C K N N I E H P R A K P L K D F R T L Q T H Y K R K H G L K P F M C R K C G K
 
AT1G34790.1     L L A V K G D W R T H E K N C G K R W V C V C G S D F K H K R S L K D H V K A F G S G H G P Y P T G L - - - - F E E Q A
pt037767_POPTR_    F L A V K G D W R T H E K N C G K R W L C V C G S D F K H K R S L K D H I K S F G L G H G P F P P S F D G V E L L D D A
 
AT1G34790.1     S N S S V S E T L F F
pt037767_POPTR_    S S L P I - - - - - -
 
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