fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35240.1 AVTNFRLFGVSLAIP at 441/590 in AT1G35240.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049739 not found in 634aa AT4G23980.2 1st_not 0.450692041 II
Pt030682 not found in 595aa AT4G23980.2 1st_not 0.448096885 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G35240.1     -METGNVV---NAQPELS-GIIDGS-KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNI
pt030682_POPTR_ MMAMNRGIGGGGGGGSLSQGNSEGCGGDDLYTELWKACAGPLVDVPKRGERVFYFPQGHM
gm049739_Glyma1 -MSLNR-----GGGGE----------EDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHM
                 *  ..     ..  .           . :* :*** ****  ::*: *:.*:*****::

AT1G35240.1     ELVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQV--VIP
pt030682_POPTR_ EQLEASTNQELNQRVPLFNLPSKILCRVIHTQLLAEQDTDEVYAQITLIPESDQIEPTSP
gm049739_Glyma1 EQLEVSTNQELNQRIPLFKLPSKILCRVVNVHLLAEQETDEVYAQITLVPESKQAEPMSP
                * ::.**.:***:  *: .****: ***:  :* .*:::**.**:***:*:: *     *

AT1G35240.1     TQSENQF-RPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPL----PLPAQELLAKDL
pt030682_POPTR_ DSSSSEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQPTPTQELVAKDL
gm049739_Glyma1 DPCPAELPSPRVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDL
                  .  :   * *:** *********::*** * :*** ****.*    . *:***:****

AT1G35240.1     HGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQ
pt030682_POPTR_ HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVACQQ
gm049739_Glyma1 QGYEWRFKHIFRGQPRRHLLTTGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQ
                :* :***:* :** *:** *****. *.***:** ** :**:**:.******:**    *

AT1G35240.1     GNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFI
pt030682_POPTR_ SSMPSSVISSQSMHLGVLATASHAVSTLTLFVVYYKP--RTSQFIISLNKYLEAVSNKFV
gm049739_Glyma1 SSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKP--RASQFIVSVNKYLEAINQKCN
                ..:***::* :.*: **:*:*.**: .  :*:* ***  *:****:* :*:*:*:.:*  

AT1G35240.1     VGSRFTMRFEGDDFSE--RRYFGTIIGVNDFSPHWKCSEWRSLEVQWDEFASFSRPNKVS
pt030682_POPTR_ VGMRFKMRFEGEDSPD--RRFSGTIVGVEDFSPHWNDSKWRSLKVQWDEPAPIPRPDRVS
gm049739_Glyma1 VGMRFKTRFEGDESPENYKRFSGTIVGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVL
                ** **. ****:: .:  :*: ***:**:*:****  *:****:***** *.:.**::* 

AT1G35240.1     PWEIEHLMSAL--NVPRSSLLKNKRLR---EVNEFG----------------QEIGQLS-
pt030682_POPTR_ PWEIEPCVASVPTNLSQPVTQKNKRPRPPFEIPALG------------------------
gm049739_Glyma1 PWEIEPILASVPTTSSQTAAIKNKRPRQASELADLGDTPLAFPTFWDAGLTQSDMAKLST
                *****  ::::  . .:.   **** *   *:  :*                        

AT1G35240.1     ----VASPMNTSLRYRDTTEDAMNPSRLLMSYPVQPMPKLNYNNQMVTQIEEN-ITTKAV
pt030682_POPTR_ -----------------------------YSTPLSSKSK---NDAILDPSDKG-RKSEVP
gm049739_Glyma1 EASWLSSP---SQLYHDTTDDSKSISAWPISKPHSERLN---NDHFLDQVDKEINKVEAA
                                              * * .   :   *: ::   ::   . :. 

AT1G35240.1     TNFRLFGVSL-----AIPLVIKDPIEEIG---------SDISKLTEGKKFGQSQTLRSPI
pt030682_POPTR_ TSYRLFGIDLVNHS-SSSTPIEVPAQLMSICSV-------------SKEQKPEQLQKSPK
gm049739_Glyma1 TSYRLFGIDLIDHARNNSLSAENASGITSECKIDVNHVSDISK--ASKEWNQEQLQLSPK
                *.:****:.*       .   : .    .                 .*:   .*   ** 

AT1G35240.1     EIQSKQ-FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWK
pt030682_POPTR_ EIQSKQSSTSTRSRTKVQMQGIAVGRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWE
gm049739_Glyma1 ETQSKQ--VCSRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQLRNKWE
                * ****   .:*: *******:::******: *.**.**: ***::**:****: *::*:

AT1G35240.1     IAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSLSS-------------
pt030682_POPTR_ IVYTDDEGDMMLVGDDPWPEFCNMVRRIYICSSQDVKRMGPGSKLPKLPIKVVFGLRGWF
gm049739_Glyma1 IVFTDDEGDMMLVGDDPWLEFCKMVRRIFIYSSQDVHKLSSGSKLPISSMEEIVT-----
                *.:**.:*  ******** ***:**::* * *.::*:.: ....*.              

AT1G35240.1     ----------
pt030682_POPTR_ KLERQEALAD
gm049739_Glyma1 SLDTTET---
BoxShade v3.31 C (beta, 970507) Output
AT1G35240.1     - M E T G N V V - - - N A Q P E L S - G I I D G S - K S Y M Y E Q L W K L C A G P L C D I P K L G E N V Y Y F P Q G N I
pt030682_POPTR_    M M A M N R G I G G G G G G G S L S Q G N S E G C G G D D L Y T E L W K A C A G P L V D V P K R G E R V F Y F P Q G H M
gm049739_Glyma1    - M S L N R - - - - - G G G G E - - - - - - - - - - E D E L Y E Q L W K A C A G P H V E V P R T G Q R V F Y F P Q G H M
 
AT1G35240.1     E L V D A S T R E E L N E L Q P I C D L P S K L Q C R V I A I H L K V E N N S D E T Y A E I T L M P D T T Q V - - V I P
pt030682_POPTR_    E Q L E A S T N Q E L N Q R V P L F N L P S K I L C R V I H T Q L L A E Q D T D E V Y A Q I T L I P E S D Q I E P T S P
gm049739_Glyma1    E Q L E V S T N Q E L N Q R I P L F K L P S K I L C R V V N V H L L A E Q E T D E V Y A Q I T L V P E S K Q A E P M S P
 
AT1G35240.1     T Q S E N Q F - R P L V N S F T K V L T A S D T S A Y G G F F V P K K H A I E C L P P L - - - - P L P A Q E L L A K D L
pt030682_POPTR_    D S S S S E P P R P T V H S F C K V L T A S D T S T H G G F S V L R K H A T E C L P P L D M T Q P T P T Q E L V A K D L
gm049739_Glyma1    D P C P A E L P S P R V H S F C K V L T A S D T S T H G G F S V L R K H A T E C L P A L D M S K S T P T Q E L V A K D L
 
AT1G35240.1     H G N Q W R F R H S Y R G T P Q R H S L T T G W N E F T T S K K L V K G D V I V F V R G E T G E L R V G I R R A R H Q Q
pt030682_POPTR_    H G Y E W R F K H I F R G Q P R R H L L T T G W S T F V T S K R L V A G D S F V F L R G E N G E L R V G V R R V A C Q Q
gm049739_Glyma1    Q G Y E W R F K H I F R G Q P R R H L L T T G W S N F V T S K R L V A G D T F V F L R G N N G E L R V G V R R I A P V Q
 
AT1G35240.1     G N I P S S I V S I D C M R H G V I A S A K H A L D N Q C I F I V V Y K P S I R S S Q F I V S Y D K F L D A M N N K F I
pt030682_POPTR_    S S M P S S V I S S Q S M H L G V L A T A S H A V S T L T L F V V Y Y K P - - R T S Q F I I S L N K Y L E A V S N K F V
gm049739_Glyma1    S S M P S S V I S S Q S M H L G V L A T A S H A V A T Q T L F V V Y Y K P - - R A S Q F I V S V N K Y L E A I N Q K C N
 
AT1G35240.1     V G S R F T M R F E G D D F S E - - R R Y F G T I I G V N D F S P H W K C S E W R S L E V Q W D E F A S F S R P N K V S
pt030682_POPTR_    V G M R F K M R F E G E D S P D - - R R F S G T I V G V E D F S P H W N D S K W R S L K V Q W D E P A P I P R P D R V S
gm049739_Glyma1    V G M R F K T R F E G D E S P E N Y K R F S G T I V G V E D I S P H W V N S N W R S L K V Q W D E P A S F P R P D R V L
 
AT1G35240.1     P W E I E H L M S A L - - N V P R S S L L K N K R L R - - - E V N E F G - - - - - - - - - - - - - - - - Q E I G Q L S -
pt030682_POPTR_    P W E I E P C V A S V P T N L S Q P V T Q K N K R P R P P F E I P A L G - - - - - - - - - - - - - - - - - - - - - - - -
gm049739_Glyma1    P W E I E P I L A S V P T T S S Q T A A I K N K R P R Q A S E L A D L G D T P L A F P T F W D A G L T Q S D M A K L S T
 
AT1G35240.1     - - - - V A S P M N T S L R Y R D T T E D A M N P S R L L M S Y P V Q P M P K L N Y N N Q M V T Q I E E N - I T T K A V
pt030682_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y S T P L S S K S K - - - N D A I L D P S D K G - R K S E V P
gm049739_Glyma1    E A S W L S S P - - - S Q L Y H D T T D D S K S I S A W P I S K P H S E R L N - - - N D H F L D Q V D K E I N K V E A A
 
AT1G35240.1     T N F R L F G V S L - - - - - A I P L V I K D P I E E I G - - - - - - - - - S D I S K L T E G K K F G Q S Q T L R S P I
pt030682_POPTR_    T S Y R L F G I D L V N H S - S S S T P I E V P A Q L M S I C S V - - - - - - - - - - - - - S K E Q K P E Q L Q K S P K
gm049739_Glyma1    T S Y R L F G I D L I D H A R N N S L S A E N A S G I T S E C K I D V N H V S D I S K - - A S K E W N Q E Q L Q L S P K
 
AT1G35240.1     E I Q S K Q - F G S T R T C T K V Q M Q G V T I G R A V D L S V L N G Y D Q L I L E L E K L F D L K G Q L Q T R N Q W K
pt030682_POPTR_    E I Q S K Q S S T S T R S R T K V Q M Q G I A V G R A V D L T M L K G Y S Q L I D E L E Q L F D I K G Q L H P R D K W E
gm049739_Glyma1    E T Q S K Q - - V C S R S C T K V Q M Q G V A V G R A V D L T T L D G Y D Q L V D E L E K M F D I K G Q L Q L R N K W E
 
AT1G35240.1     I A F T D S D G Y E M L V G D D P W P E F C K M V K K I L I Y S K E E V K N L K S S K S L S S - - - - - - - - - - - - -
pt030682_POPTR_    I V Y T D D E G D M M L V G D D P W P E F C N M V R R I Y I C S S Q D V K R M G P G S K L P K L P I K V V F G L R G W F
gm049739_Glyma1    I V F T D D E G D M M L V G D D P W L E F C K M V R R I F I Y S S Q D V H K L S S G S K L P I S S M E E I V T - - - - -
 
AT1G35240.1     - - - - - - - - - -
pt030682_POPTR_    K L E R Q E A L A D
gm049739_Glyma1    S L D T T E T - - -
 
0