fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp036956 not found in 480aa AT1G35460.1 1st_1st 0.238095238 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35460.1     ------------------------------------------MQSTH---ISGGSSGG--
pp036956_Pp1s83 MCGQAVAIMDGSVSAIMQSHRGISHAYYPSGMGAVDEEISAMLQSGHHSCIGQGSLAGVM
                                                          :** *   *. ** .*  

AT1G35460.1     ------------------GG-------------------GGG------------------
pp036956_Pp1s83 APAVTAGLDHFPYNLYNQGGYVGNHSRPVSQMQRSTSMPGGGLRDGPTHVGSPPQHRGSP
                                  **                   ***                  

AT1G35460.1     -----------------------GEVSRSG---------------------LSRIRSAPA
pp036956_Pp1s83 PQSRPAFNMEDKYVLESRSEVLDASILRNGSNYGVVYENSVPSSMTLSMPVLHHYHSAPA
                                       ..: *.*                     * : :****

AT1G35460.1     TWIETLLEEDEEEGLKPNLCLTELLTGNN-NS---------GGVITSRDDSFEFLSSVEQ
pp036956_Pp1s83 N---SVLADTNEEQIG-NTVMSSMFTGDGLNSITENMDVERMGSGNSNPNEFEHYLAPEN
                .   ::* : :** :  *  ::.::**:. **          *  .*. :.**.  : *:

AT1G35460.1     GLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNFGIP-ANYDYLSTNVD---------
pp036956_Pp1s83 DFSGQAAFPSLRKEVGTPDSFGSTSKSSKNGLFSQTSLPSAGLSQLNSAVQDRMAENGSG
                .: .:    .:::: .:* .* * * *..:* **: .:* *. . *.: *:         

AT1G35460.1     --------------------------------ISPTKRSR----DMET------------
pp036956_Pp1s83 KSSSRDSDDNNHLINGYTALIYTQEDFTWKSPTSPAKRQRGLDGDSETSSGSAEGSTYRN
                                                 **:**.*    * **            

AT1G35460.1     -QFSSQLKEEQMSGGISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISD
pp036956_Pp1s83 CQHSGLVRHMSLPSTNGGPNSPGLEDNHYGAVPMRTRAKRGCATHPRSIAERVRRTKISE
                 *.*. ::. .:..  .*  . .::. . .:** *.********************:**:

AT1G35460.1     RIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKCKPKEEQ------
pp036956_Pp1s83 RMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQRKVQELSDTVARLKADASQRAKNSNNN
                *::***:***********:***:*:*****:** ::***::   * *....:.       

AT1G35460.1     ----
pp036956_Pp1s83 NSSN
BoxShade v3.31 C (beta, 970507) Output
AT1G35460.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q S T H - - - I S G G S S G G - -
pp036956_Pp1s83    M C G Q A V A I M D G S V S A I M Q S H R G I S H A Y Y P S G M G A V D E E I S A M L Q S G H H S C I G Q G S L A G V M
 
AT1G35460.1     - - - - - - - - - - - - - - - - - - G G - - - - - - - - - - - - - - - - - - - G G G - - - - - - - - - - - - - - - - - -
pp036956_Pp1s83    A P A V T A G L D H F P Y N L Y N Q G G Y V G N H S R P V S Q M Q R S T S M P G G G L R D G P T H V G S P P Q H R G S P
 
AT1G35460.1     - - - - - - - - - - - - - - - - - - - - - - - G E V S R S G - - - - - - - - - - - - - - - - - - - - - L S R I R S A P A
pp036956_Pp1s83    P Q S R P A F N M E D K Y V L E S R S E V L D A S I L R N G S N Y G V V Y E N S V P S S M T L S M P V L H H Y H S A P A
 
AT1G35460.1     T W I E T L L E E D E E E G L K P N L C L T E L L T G N N - N S - - - - - - - - - G G V I T S R D D S F E F L S S V E Q
pp036956_Pp1s83    N - - - S V L A D T N E E Q I G - N T V M S S M F T G D G L N S I T E N M D V E R M G S G N S N P N E F E H Y L A P E N
 
AT1G35460.1     G L Y N H H Q G G G F H R Q N S S P A D F L S G S G S G T D G Y F S N F G I P - A N Y D Y L S T N V D - - - - - - - - -
pp036956_Pp1s83    D F S G Q A A F P S L R K E V G T P D S F G S T S K S S K N G L F S Q T S L P S A G L S Q L N S A V Q D R M A E N G S G
 
AT1G35460.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I S P T K R S R - - - - D M E T - - - - - - - - - - - -
pp036956_Pp1s83    K S S S R D S D D N N H L I N G Y T A L I Y T Q E D F T W K S P T S P A K R Q R G L D G D S E T S S G S A E G S T Y R N
 
AT1G35460.1     - Q F S S Q L K E E Q M S G G I S G M M D M N M D K I F E D S V P C R V R A K R G C A T H P R S I A E R V R R T R I S D
pp036956_Pp1s83    C Q H S G L V R H M S L P S T N G G P N S P G L E D N H Y G A V P M R T R A K R G C A T H P R S I A E R V R R T K I S E
 
AT1G35460.1     R I R R L Q E L V P N M D K Q T N T A D M L E E A V E Y V K A L Q S Q I Q E L T E Q Q K R C K C K P K E E Q - - - - - -
pp036956_Pp1s83    R M K R L Q D L V P N M D K Q T N T S D M L D E T V E Y V K S L Q R K V Q E L S D T V A R L K A D A S Q R A K N S N N N
 
AT1G35460.1     - - - -
pp036956_Pp1s83    N S S N
 
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