fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015609 not found in 230aa AT1G35460.1 1st_1st 0.390476190 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35460.1     -----MQSTHISGGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCL
pt015609_POPTR_ MHPAPAGSSNTSGGGCGGGGGGGGG-GGGGLPRLRSAPATWLLALLEEEEEDPLKQNQNL
                       *:: ***..********  . .**.*:*******: :****:**: ** *  *

AT1G35460.1     TELLTGNNNSGGVITSRDDSFEFLSS---VEQGLYNHHQGGGFHRQNSSPADFLSGSGSG
pt015609_POPTR_ TQLLTSNAPS-----SR-NSAPFNASSAAVEPGLY--ETGSGFQRQNSSPADFLGNSGIG
                *:***.*  *     ** :*  * :*   ** ***  . *.**:**********..** *

AT1G35460.1     TD-GYFSNFGIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGI--SG
pt015609_POPTR_ SDQGYFSNYGIASNYEYMPPNMEVSPSAKRARELELQNPPARYPPPLKGAQ-TGSLRASS
                :* *****:**.:**:*:..*:::**: **:*::* *     :.. **  * :*.:  *.

AT1G35460.1     MMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNT
pt015609_POPTR_ LIEMEMDKLLEESVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKVTPF
                :::*:***::*:****::***************************:********** *  

AT1G35460.1     ADMLEEAVEYVKALQSQIQELTEQQKRCKCKPKEEQ
pt015609_POPTR_ ------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G35460.1     - - - - - M Q S T H I S G G S S G G G G G G G G E V S R S G L S R I R S A P A T W I E T L L E E D E E E G L K P N L C L
pt015609_POPTR_    M H P A P A G S S N T S G G G C G G G G G G G G G - G G G G L P R L R S A P A T W L L A L L E E E E E D P L K Q N Q N L
 
AT1G35460.1     T E L L T G N N N S G G V I T S R D D S F E F L S S - - - V E Q G L Y N H H Q G G G F H R Q N S S P A D F L S G S G S G
pt015609_POPTR_    T Q L L T S N A P S - - - - - S R - N S A P F N A S S A A V E P G L Y - - E T G S G F Q R Q N S S P A D F L G N S G I G
 
AT1G35460.1     T D - G Y F S N F G I P A N Y D Y L S T N V D I S P T - K R S R D M E T Q - - - - - F S S Q L K E E Q M S G G I - - S G
pt015609_POPTR_    S D Q G Y F S N Y G I A S N Y E Y M P P N M E V S P S A K R A R E L E L Q N P P A R Y P P P L K G A Q - T G S L R A S S
 
AT1G35460.1     M M D M N M D K I F E D S V P C R V R A K R G C A T H P R S I A E R V R R T R I S D R I R R L Q E L V P N M D K Q T N T
pt015609_POPTR_    L I E M E M D K L L E E S V P C K I R A K R G C A T H P R S I A E R V R R T R I S D R I R K L Q E L V P N M D K V T P F
 
AT1G35460.1     A D M L E E A V E Y V K A L Q S Q I Q E L T E Q Q K R C K C K P K E E Q
pt015609_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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