fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm022377 not found in 157aa AT1G35460.1 1st_1st 0.297619047 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35460.1     MQSTHISGGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLT
gm022377_Glyma0 MQPT------SGGG----------GLARFRSAPASWLESVLLKEEEEEEDP-LSFTQLL-
                **.*      ****          **:*:*****:*:*::* ::***  .* *.:*:** 

AT1G35460.1     GNNNSGGVITSRDDSFEFLSSVEQGLYNHHQ--GGGFHRQNSSPADFLSGSGSGTDGYFS
gm022377_Glyma0 ---------STIDDAPS---------HSQHQLYGAALSNKDKTPEIFM------------
                         :: **: .         :.:**  *..: .::.:*  *:            

AT1G35460.1     NFGIPANYDYLSTNVDISPTKRSRDMETQFSSQLKEEQMSGGISGMMDMNMDKIFEDSVP
gm022377_Glyma0 ------------------------------------------------------LEDSVP
                                                                      :*****

AT1G35460.1     CRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQ
gm022377_Glyma0 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQ
                ******************************:******************:*** *** **

AT1G35460.1     SQIQELTEQQKRCKCKPKEEQ
gm022377_Glyma0 KQIEELSEHQRRCKCVVQE--
                .**:**:*:*:****  :*
BoxShade v3.31 C (beta, 970507) Output
AT1G35460.1     M Q S T H I S G G S S G G G G G G G G E V S R S G L S R I R S A P A T W I E T L L E E D E E E G L K P N L C L T E L L T
gm022377_Glyma0    M Q P T - - - - - - S G G G - - - - - - - - - - G L A R F R S A P A S W L E S V L L K E E E E E E D P - L S F T Q L L -
 
AT1G35460.1     G N N N S G G V I T S R D D S F E F L S S V E Q G L Y N H H Q - - G G G F H R Q N S S P A D F L S G S G S G T D G Y F S
gm022377_Glyma0    - - - - - - - - - S T I D D A P S - - - - - - - - - H S Q H Q L Y G A A L S N K D K T P E I F M - - - - - - - - - - - -
 
AT1G35460.1     N F G I P A N Y D Y L S T N V D I S P T K R S R D M E T Q F S S Q L K E E Q M S G G I S G M M D M N M D K I F E D S V P
gm022377_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L E D S V P
 
AT1G35460.1     C R V R A K R G C A T H P R S I A E R V R R T R I S D R I R R L Q E L V P N M D K Q T N T A D M L E E A V E Y V K A L Q
gm022377_Glyma0    C R V R A K R G C A T H P R S I A E R V R R T R I S D R I R K L Q E L V P N M D K Q T N T A D M L D E A V A Y V K F L Q
 
AT1G35460.1     S Q I Q E L T E Q Q K R C K C K P K E E Q
gm022377_Glyma0    K Q I E E L S E H Q R R C K C V V Q E - -
 
0