fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35515.1 DHLDKELNLDLTLGYS at 190/212 in AT1G35515.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp002778 not found in 471aa AT5G15310.1 1st_not 0.442477876 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35515.1     MGRSPCCEKAHMNKGAWTKEEDQRLIDYIRNHGEGSWRSLPKSVGLLRCGKSCRLRWINY
pp002778_Pp1s31 MGRTPCCDKMGLKKGPWTPDEDQKLVTYIQRNGHGSWRALPKHAGLLRCGKSCRLRWTNY
                ***:***:*  ::**.** :***:*: **:.:*.****:*** .************* **

AT1G35515.1     LRPDLKRGNFTDGEEQIIVKLHSLFGNKWSLIAGKLPGRTDNEIKNYWNTHIKRKLLNRG
pp002778_Pp1s31 LRPDIKRGRFSFEEEQVIIHLHGILGNRWSAIAAHLPGRTDNEIKNYWNTHLRKRLLQMG
                ****:***.*:  ***:*::**.::**:** **.:****************::::**: *

AT1G35515.1     IDPKTH--------------------------------------------------GSII
pp002778_Pp1s31 IDPVTHKVRSNLLIENLDLKPMVSSTLSHMSQWDRVRMEMEARLSSDYFAKSSAHGAAIF
                *** **                                                  .:*:

AT1G35515.1     EPKTT---------------------------------------------------SFH-
pp002778_Pp1s31 EASGTSASFIKAPSDCSMRSWKTQVSESLLRRDFGVLEKLPPCSMDLQTVLQDWEDSLHC
                *.. *                                                   *:* 

AT1G35515.1     ---------------------------PRNE--------DLKSTF----------PGSVK
pp002778_Pp1s31 QPMEPGLYDSQMRAKTHSGSHSGYSQTPRNDNCSGTTVTDLAARFETFPSFHQTSPSPSP
                                           ***:        ** : *          *..  

AT1G35515.1     LKMETSCENCASTSGT-------------------------------TTDEDLRL---SV
pp002778_Pp1s31 LPQTSQISDSFTSSGTKLFPDLPKPNSLPSMIPEHFSPTSTLSSPFGTSPSDFMVPPPSS
                *   :. .:. ::***                               *: .*: :   * 

AT1G35515.1     DCDYRYD----------------------------------HLDKELNL-----DLTLGY
pp002778_Pp1s31 NCEIAFSTSPPLQLPSPTFWTSLSAPTTMGAGDLQLPSEIPELLMELHAEPAVPDLIVAT
                :*:  :.                                  .*  **:      ** :. 

AT1G35515.1     SPTRFVG-----------------------VGSCY----------------
pp002778_Pp1s31 VPTTTAGTPGWTSQQGLIESKDYWANMLHLVGPPASQQLSTLLSTPARLTR
                 **  .*                       **.
BoxShade v3.31 C (beta, 970507) Output
AT1G35515.1     M G R S P C C E K A H M N K G A W T K E E D Q R L I D Y I R N H G E G S W R S L P K S V G L L R C G K S C R L R W I N Y
pp002778_Pp1s31    M G R T P C C D K M G L K K G P W T P D E D Q K L V T Y I Q R N G H G S W R A L P K H A G L L R C G K S C R L R W T N Y
 
AT1G35515.1     L R P D L K R G N F T D G E E Q I I V K L H S L F G N K W S L I A G K L P G R T D N E I K N Y W N T H I K R K L L N R G
pp002778_Pp1s31    L R P D I K R G R F S F E E E Q V I I H L H G I L G N R W S A I A A H L P G R T D N E I K N Y W N T H L R K R L L Q M G
 
AT1G35515.1     I D P K T H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S I I
pp002778_Pp1s31    I D P V T H K V R S N L L I E N L D L K P M V S S T L S H M S Q W D R V R M E M E A R L S S D Y F A K S S A H G A A I F
 
AT1G35515.1     E P K T T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S F H -
pp002778_Pp1s31    E A S G T S A S F I K A P S D C S M R S W K T Q V S E S L L R R D F G V L E K L P P C S M D L Q T V L Q D W E D S L H C
 
AT1G35515.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - P R N E - - - - - - - - D L K S T F - - - - - - - - - - P G S V K
pp002778_Pp1s31    Q P M E P G L Y D S Q M R A K T H S G S H S G Y S Q T P R N D N C S G T T V T D L A A R F E T F P S F H Q T S P S P S P
 
AT1G35515.1     L K M E T S C E N C A S T S G T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T T D E D L R L - - - S V
pp002778_Pp1s31    L P Q T S Q I S D S F T S S G T K L F P D L P K P N S L P S M I P E H F S P T S T L S S P F G T S P S D F M V P P P S S
 
AT1G35515.1     D C D Y R Y D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H L D K E L N L - - - - - D L T L G Y
pp002778_Pp1s31    N C E I A F S T S P P L Q L P S P T F W T S L S A P T T M G A G D L Q L P S E I P E L L M E L H A E P A V P D L I V A T
 
AT1G35515.1     S P T R F V G - - - - - - - - - - - - - - - - - - - - - - - V G S C Y - - - - - - - - - - - - - - - -
pp002778_Pp1s31    V P T T T A G T P G W T S Q Q G L I E S K D Y W A N M L H L V G P P A S Q Q L S T L L S T P A R L T R
 
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