fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35515.1 DHLDKELNLDLTLGYS at 190/212 in AT1G35515.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os021729 EPRCPDLNLELSVGPT in 197/260 AT4G38620.1 1st_not 0.555309734 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35515.1     MGRSPCCEKAHMNKGAWTKEEDQRLIDYIRNHGEGSWRSLPKSVGLLRCGKSCRLRWINY
Os021729_Os05t0 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY
                *********** ************** *** ****.******:.*************:**

AT1G35515.1     LRPDLKRGNFTDGEEQIIVKLHSLFGNKWSLIAGKLPGRTDNEIKNYWNTHIKRKLLNRG
Os021729_Os05t0 LRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLARG
                ************.*:::*::****:*********:********************** **

AT1G35515.1     IDPKTHGSIIE---------------PKTTSFHPRNEDLKSTF----PGSVKLKMETSCE
Os021729_Os05t0 IDPQTHRPLLSGGDGIAASNKAAPPPPHPISV-PAKAAAAAIFAVAKPPPPPRPVDSSDD
                ***:** .::.               *:. *. * :    : *    * .    :::* :

AT1G35515.1     NCASTSGTTTDEDLRLSVDCDYRYDHLDKELNLDLTLGYSPTR-----------------
Os021729_Os05t0 GCRSSSGTTSTGEPR----C--------PDLNLELSVGPTPSSPPAETPTSARPVCLCYH
                .* *:****:  : *    *         :***:*::* :*:                  

AT1G35515.1     --FVGVGSCY-----------------------
Os021729_Os05t0 LGFRGGEACSCQADSKGPHEFRYFRPLEQGQYI
                  * *  :*
BoxShade v3.31 C (beta, 970507) Output
AT1G35515.1     M G R S P C C E K A H M N K G A W T K E E D Q R L I D Y I R N H G E G S W R S L P K S V G L L R C G K S C R L R W I N Y
Os021729_Os05t0    M G R S P C C E K A H T N K G A W T K E E D Q R L I A Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W M N Y
 
AT1G35515.1     L R P D L K R G N F T D G E E Q I I V K L H S L F G N K W S L I A G K L P G R T D N E I K N Y W N T H I K R K L L N R G
Os021729_Os05t0    L R P D L K R G N F T D D E D E L I I R L H S L L G N K W S L I A G Q L P G R T D N E I K N Y W N T H I K R K L L A R G
 
AT1G35515.1     I D P K T H G S I I E - - - - - - - - - - - - - - - P K T T S F H P R N E D L K S T F - - - - P G S V K L K M E T S C E
Os021729_Os05t0    I D P Q T H R P L L S G G D G I A A S N K A A P P P P H P I S V - P A K A A A A A I F A V A K P P P P P R P V D S S D D
 
AT1G35515.1     N C A S T S G T T T D E D L R L S V D C D Y R Y D H L D K E L N L D L T L G Y S P T R - - - - - - - - - - - - - - - - -
Os021729_Os05t0    G C R S S S G T T S T G E P R - - - - C - - - - - - - - P D L N L E L S V G P T P S S P P A E T P T S A R P V C L C Y H
 
AT1G35515.1     - - F V G V G S C Y - - - - - - - - - - - - - - - - - - - - - - -
Os021729_Os05t0    L G F R G G E A C S C Q A D S K G P H E F R Y F R P L E Q G Q Y I
 
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