fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35515.1 DHLDKELNLDLTLGYS at 190/212 in AT1G35515.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009095 APRCPDLNLDLDLSVG in 194/269 AT4G38620.1 1st_not 0.546460176 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35515.1     MGRSPCCEKAHMNKGAWTKEEDQRLIDYIRNHGEGSWRSLPKSVGLLRCGKSCRLRWINY
Sb009095_Sorbi1 MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY
                *********** ************** **: ****.******:.*************:**

AT1G35515.1     LRPDLKRGNFTDGEEQIIVKLHSLFGNKWSLIAGKLPGRTDNEIKNYWNTHIKRKLLNRG
Sb009095_Sorbi1 LRPDLKRGNFTDDDDEIIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRG
                ************.:::**:***:*:*********:**********************.**

AT1G35515.1     IDPKTH---------GSIIEPKTTSFHPRNEDLKS-------TFPGSVKLKMETSCENCA
Sb009095_Sorbi1 IDPQTHRPLSGGAAAGSGLTTSSTAGFPAQAPAPTRPARPVIIIPPNVMFARPAPSEDGH
                ***:**         ** : ..:*: .* :    :        :* .* :   :..*:  

AT1G35515.1     STSGTTTDEDLRLSVDCDYRYDHLDKELNLDLTLG-------------YSPT------RF
Sb009095_Sorbi1 SSSGGSTD-----APRCP------DLNLDLDLSVGPPCSPPKTPAAAVTTPTSQQQEMQR
                *:** :**     :  *       * :*:***::*              :**      : 

AT1G35515.1     VGVGSCY---------------------------------
Sb009095_Sorbi1 ATICLCYHLGVRSGDACSCKTAASPAGFRFLRPLEEGQYI
                . :  **
BoxShade v3.31 C (beta, 970507) Output
AT1G35515.1     M G R S P C C E K A H M N K G A W T K E E D Q R L I D Y I R N H G E G S W R S L P K S V G L L R C G K S C R L R W I N Y
Sb009095_Sorbi1    M G R S P C C E K A H T N K G A W T K E E D Q R L I A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W M N Y
 
AT1G35515.1     L R P D L K R G N F T D G E E Q I I V K L H S L F G N K W S L I A G K L P G R T D N E I K N Y W N T H I K R K L L N R G
Sb009095_Sorbi1    L R P D L K R G N F T D D D D E I I I K L H A L L G N K W S L I A G Q L P G R T D N E I K N Y W N T H I K R K L L S R G
 
AT1G35515.1     I D P K T H - - - - - - - - - G S I I E P K T T S F H P R N E D L K S - - - - - - - T F P G S V K L K M E T S C E N C A
Sb009095_Sorbi1    I D P Q T H R P L S G G A A A G S G L T T S S T A G F P A Q A P A P T R P A R P V I I I P P N V M F A R P A P S E D G H
 
AT1G35515.1     S T S G T T T D E D L R L S V D C D Y R Y D H L D K E L N L D L T L G - - - - - - - - - - - - - Y S P T - - - - - - R F
Sb009095_Sorbi1    S S S G G S T D - - - - - A P R C P - - - - - - D L N L D L D L S V G P P C S P P K T P A A A V T T P T S Q Q Q E M Q R
 
AT1G35515.1     V G V G S C Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb009095_Sorbi1    A T I C L C Y H L G V R S G D A C S C K T A A S P A G F R F L R P L E E G Q Y I
 
0