fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G35540.1 AVASFRLFGVSLATP at 456/605 in AT1G35540.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030682 not found in 595aa AT4G23980.2 1st_not 0.476190476 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G35540.1     ---ME--------SGNVVNTQPELSGIIDGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYF
pt030682_POPTR_ MMAMNRGIGGGGGGGSLSQGNSEGCGGDD-----LYTELWKACAGPLVDVPKRGERVFYF
                   *:        .*.: : :.* .*  *     :* :*** ***** *:** **:*:**

AT1G35540.1     PQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQV
pt030682_POPTR_ PQGHMEQLEASTNQELNQRVPLFNLPSKILCRVIHTQLLAEQDTDEVYAQITLIPESDQI
                ****:* :****.:***:  *: ::***: ****  ** .*:::**.**:***:*:: *:

AT1G35540.1     VIPTQNQNQF----RPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQE
pt030682_POPTR_ E-PTSPDSSSSEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQPTPTQE
                  **. :..     ** *:** *********.****** :*** ********:** ****

AT1G35540.1     ILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIR
pt030682_POPTR_ LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
                ::* **** :***:**:** .:***** **.:*.***:** ** :**:***.******:*

AT1G35540.1     RAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDVVN
pt030682_POPTR_ RVACQQSSMPSSVISSQSMHLGVLATASHAVSTLTLFVVYYKPRTSQFIISLNKYLEAVS
                *.. **..:***::* :**: *::*:*.**...  :*:* ****:****:* :*:*:.*.

AT1G35540.1     NKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQ
pt030682_POPTR_ NKFVVGMRFKMRFEGEDSPDRRFSGTIVGVEDFSPHWNDSKWRSLKVQWDEPAPIPRPDR
                *** ** **.*****:* .:**  ***:**.******: *:****:***** *.:***::

AT1G35540.1     VSPWDIEHL---TPWSNVSRSSFLKNKRSREVNEIGSSSSHLLPPTLTQGQEIGQQSMAT
pt030682_POPTR_ VSPWEIEPCVASVP-TNLSQPVTQKNKRPR-------------PPF-----EIPALGYST
                ****:**     .* :*:*:.   ****.*             **      **   . :*

AT1G35540.1     PMNISLRYRDITEDAMTPSRLLMSYPVQPMAKLNYNNVVTPIEENITTNAVASFRLFGVS
pt030682_POPTR_ PLS---------------------------SKSKNDAILDPSDKGRKSEVPTSYRLFGID
                *:.                           :* : : :: * ::. .::. :*:****:.

AT1G35540.1     LATPSVIKDPVE---QIGLEISRLTQEKKFGQSQILRSPTEIQSKQFS-STRTCTKVQMQ
pt030682_POPTR_ LVNHSSSSTPIEVPAQL-MSICSVSKEQK--PEQLQKSPKEIQSKQSSTSTRSRTKVQMQ
                *.. *  . *:*   *: :.*. :::*:*   .*: :**.****** * ***: ******

AT1G35540.1     GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPE
pt030682_POPTR_ GIAVGRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPE
                *:::******::*:**.*** ***:***:****:.*::***.:*::* * ****:*****

AT1G35540.1     FCNMVKKIFIYSKEEVK-----------------------NLKSRKSLSS
pt030682_POPTR_ FCNMVRRIYICSSQDVKRMGPGSKLPKLPIKVVFGLRGWFKLERQEALAD
                *****::*:* *.::**                       :*: :::*:.
BoxShade v3.31 C (beta, 970507) Output
AT1G35540.1     - - - M E - - - - - - - - S G N V V N T Q P E L S G I I D G S K S Y M Y E Q L W K L C A G P L C D I P K L G E K V Y Y F
pt030682_POPTR_    M M A M N R G I G G G G G G G S L S Q G N S E G C G G D D - - - - - L Y T E L W K A C A G P L V D V P K R G E R V F Y F
 
AT1G35540.1     P Q G H I E L V E A S T R E E L N E L Q P I C D F P S K L Q C R V I A I Q L K V E N N S D E T Y A E I T L M P D T T Q V
pt030682_POPTR_    P Q G H M E Q L E A S T N Q E L N Q R V P L F N L P S K I L C R V I H T Q L L A E Q D T D E V Y A Q I T L I P E S D Q I
 
AT1G35540.1     V I P T Q N Q N Q F - - - - R P L V N S F T K V L T A S D T S V H G G F S V P K K H A I E C L P P L D M S Q P L P T Q E
pt030682_POPTR_    E - P T S P D S S S S E P P R P T V H S F C K V L T A S D T S T H G G F S V L R K H A T E C L P P L D M T Q P T P T Q E
 
AT1G35540.1     I L A I D L H G N Q W R F R H I Y R G T A Q R H L L T I G W N A F T T S K K L V E G D V I V F V R G E T G E L R V G I R
pt030682_POPTR_    L V A K D L H G Y E W R F K H I F R G Q P R R H L L T T G W S T F V T S K R L V A G D S F V F L R G E N G E L R V G V R
 
AT1G35540.1     R A G H Q Q G N I P S S I V S I E S M R H G I I A S A K H A F D N Q C M F I V V Y K P R S S Q F I V S Y D K F L D V V N
pt030682_POPTR_    R V A C Q Q S S M P S S V I S S Q S M H L G V L A T A S H A V S T L T L F V V Y Y K P R T S Q F I I S L N K Y L E A V S
 
AT1G35540.1     N K F N V G S R F T M R F E G D D F S E R R S F G T I I G V S D F S P H W K C S E W R S L E V Q W D E F A S F P R P N Q
pt030682_POPTR_    N K F V V G M R F K M R F E G E D S P D R R F S G T I V G V E D F S P H W N D S K W R S L K V Q W D E P A P I P R P D R
 
AT1G35540.1     V S P W D I E H L - - - T P W S N V S R S S F L K N K R S R E V N E I G S S S S H L L P P T L T Q G Q E I G Q Q S M A T
pt030682_POPTR_    V S P W E I E P C V A S V P - T N L S Q P V T Q K N K R P R - - - - - - - - - - - - - P P F - - - - - E I P A L G Y S T
 
AT1G35540.1     P M N I S L R Y R D I T E D A M T P S R L L M S Y P V Q P M A K L N Y N N V V T P I E E N I T T N A V A S F R L F G V S
pt030682_POPTR_    P L S - - - - - - - - - - - - - - - - - - - - - - - - - - - S K S K N D A I L D P S D K G R K S E V P T S Y R L F G I D
 
AT1G35540.1     L A T P S V I K D P V E - - - Q I G L E I S R L T Q E K K F G Q S Q I L R S P T E I Q S K Q F S - S T R T C T K V Q M Q
pt030682_POPTR_    L V N H S S S S T P I E V P A Q L - M S I C S V S K E Q K - - P E Q L Q K S P K E I Q S K Q S S T S T R S R T K V Q M Q
 
AT1G35540.1     G V T I G R A V D L S V L N G Y D Q L I L E L E K L F D L K G Q L Q A R N Q W E I A F T N N E E D K M L V G E D P W P E
pt030682_POPTR_    G I A V G R A V D L T M L K G Y S Q L I D E L E Q L F D I K G Q L H P R D K W E I V Y T D D E G D M M L V G D D P W P E
 
AT1G35540.1     F C N M V K K I F I Y S K E E V K - - - - - - - - - - - - - - - - - - - - - - - N L K S R K S L S S
pt030682_POPTR_    F C N M V R R I Y I C S S Q D V K R M G P G S K L P K L P I K V V F G L R G W F K L E R Q E A L A D
 
0