fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G42990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001661 IAENHALRLSLQRGNA in 197/306 AT1G42990.1 1st_1st 0.267260579 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G42990.1     MAEEFGSIDLLG------------DEDFFFDFDPSIVIDSLPAEDFLQSSP----DSWIG
pt001661_POPTR_ -MEFLEGDDVLGQIDWDNLLDGFPDSDSIFELEPPLTTDLQPINDSSNSSSPATVSSWIG
                  * : . *:**            *.* :*:::*.:. *  * :*  :**.    .****

AT1G42990.1     EIENQLMNDENHQEESFVELDQ-QSVSDFIADLLVDYPTS-DSGS--VDLAADKVLTVDS
pt001661_POPTR_ EVETLLMKDDDDK------VDQLENCNAFLADILVDSPSAHESGGEVLDASTDK----DS
                *:*. **:*::.:      :** :. . *:**:*** *:: :**.  :* ::**    **

AT1G42990.1     PAAADDSGKENSDLVVEKKSNDSGSEIHDDDDEEGDDDAVAKKRRRRVRNRDAAVRSRER
pt001661_POPTR_ TSSDDADGG-------PKEKDDGAEEKNNNDEEEDPDDIVSKKRRRQLRNKDAAVRSRER
                .:: * .*         *:.:*...* :::*:**. ** *:*****::**:*********

AT1G42990.1     KKEYVQDLEKKSKYLERECLRLGRMLECFVAENQSLRYCLQKGNGNNTTMMSKQESAVLL
pt001661_POPTR_ KKLHVRDLEIKSRYLEGECRRLDRLLQCFIAENHALRLSLQRGNAFGVT-SAKQESAVLL
                ** :*:*** **:*** ** **.*:*:**:***::** .**:**. ..*  :********

AT1G42990.1     LESLLLGSLLWLLGVNFICLFPYMSHTKCCLL--------RPEPEKLVLNGLGSSSKPSY
pt001661_POPTR_ LESLLLGSLLWLLGI--MCLFPQPAMPQSTMVEVLLETMEKKAPENVAQRGAGSKIFISL
                **************:  :****  : .:. ::        :  **::. .* **.   * 

AT1G42990.1     TGVSRRCKGSRPRMK-----YQILTLAA
pt001661_POPTR_ AN-SRRCKASRPRMKLTGVIFPSLNLVL
                :. *****.******     :  *.*.
BoxShade v3.31 C (beta, 970507) Output
AT1G42990.1     M A E E F G S I D L L G - - - - - - - - - - - - D E D F F F D F D P S I V I D S L P A E D F L Q S S P - - - - D S W I G
pt001661_POPTR_    - M E F L E G D D V L G Q I D W D N L L D G F P D S D S I F E L E P P L T T D L Q P I N D S S N S S S P A T V S S W I G
 
AT1G42990.1     E I E N Q L M N D E N H Q E E S F V E L D Q - Q S V S D F I A D L L V D Y P T S - D S G S - - V D L A A D K V L T V D S
pt001661_POPTR_    E V E T L L M K D D D D K - - - - - - V D Q L E N C N A F L A D I L V D S P S A H E S G G E V L D A S T D K - - - - D S
 
AT1G42990.1     P A A A D D S G K E N S D L V V E K K S N D S G S E I H D D D D E E G D D D A V A K K R R R R V R N R D A A V R S R E R
pt001661_POPTR_    T S S D D A D G G - - - - - - - P K E K D D G A E E K N N N D E E E D P D D I V S K K R R R Q L R N K D A A V R S R E R
 
AT1G42990.1     K K E Y V Q D L E K K S K Y L E R E C L R L G R M L E C F V A E N Q S L R Y C L Q K G N G N N T T M M S K Q E S A V L L
pt001661_POPTR_    K K L H V R D L E I K S R Y L E G E C R R L D R L L Q C F I A E N H A L R L S L Q R G N A F G V T - S A K Q E S A V L L
 
AT1G42990.1     L E S L L L G S L L W L L G V N F I C L F P Y M S H T K C C L L - - - - - - - - R P E P E K L V L N G L G S S S K P S Y
pt001661_POPTR_    L E S L L L G S L L W L L G I - - M C L F P Q P A M P Q S T M V E V L L E T M E K K A P E N V A Q R G A G S K I F I S L
 
AT1G42990.1     T G V S R R C K G S R P R M K - - - - - Y Q I L T L A A
pt001661_POPTR_    A N - S R R C K A S R P R M K L T G V I F P S L N L V L
 
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