fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G43160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016685 not found in 420aa AT1G43160.1 1st_1st 0.275862068 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G43160.1     ------------------------------------------------------------
Sb016685_Sorbi1 MCHAAVANSGEQEHQRRRRPLAVAAAVAAAADDDDGGGGRGQPLPGEPHAIDTAGAVSSS
                                                                            

AT1G43160.1     ----------------------MVSMLTNVVSGETEPSAS--------------ATW---
Sb016685_Sorbi1 SSSSAAAAAPWQSSRQSREMSAMVAALAKVVAGSAPPAAAEEPALAQEDASMDEAWWPYE
                                      **: *::**:*.: *:*:              * *   

AT1G43160.1     ---------------------------------TMGHKRERE-------EFSLP-PQPLI
Sb016685_Sorbi1 DLHVAEPSSPARFVLHGYGATEPSEQYWPAAAATYSHSQSQHGAASAATDDELPSPTSAV
                                                 * .*.:.:.       : .** * . :

AT1G43160.1     TGSAVTKECESSMSLE--RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAAR
Sb016685_Sorbi1 GGSTSTSTSSRARAAAPVRNKRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEDAAR
                 **: *. .. : :    * *:**********************:*******:*** ***

AT1G43160.1     AYDAAALRFRGSKAKLNFPENV----------GTQTIQRNSHFLQNSMQPSLTYIDQCPT
Sb016685_Sorbi1 AYDAAALRFRGSRAKLNFPESATLPFSTPPPPATAT---HHHQQQPPLTPASRALTTTPP
                ************:*******..          .* *   : *  * .: *:   :   *.

AT1G43160.1     LLSYSRCMEQQQPL----------------------------------------------
Sb016685_Sorbi1 PLARPEALLESQALPAGGGSRDPYLDYARFLQSGGDGGGGDPSASSGTPAPSVTLPPPPA
                 *: ...: :.*.*                                              

AT1G43160.1     --------------------VGMLQP-------TEEENH-------FFEK-----PWTEY
Sb016685_Sorbi1 VPASAAAAYGFGGEGETLRGYGYLSPPPQRQSSAEPGNHPPAAWAGFYSSSYPPPPWP-W
                                     * *.*       :*  **       *:..     **. :

AT1G43160.1     DQYNYSSFG
Sb016685_Sorbi1 DQSG-----
                ** .
BoxShade v3.31 C (beta, 970507) Output
AT1G43160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016685_Sorbi1    M C H A A V A N S G E Q E H Q R R R R P L A V A A A V A A A A D D D D G G G G R G Q P L P G E P H A I D T A G A V S S S
 
AT1G43160.1     - - - - - - - - - - - - - - - - - - - - - - M V S M L T N V V S G E T E P S A S - - - - - - - - - - - - - - A T W - - -
Sb016685_Sorbi1    S S S S A A A A A P W Q S S R Q S R E M S A M V A A L A K V V A G S A P P A A A E E P A L A Q E D A S M D E A W W P Y E
 
AT1G43160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T M G H K R E R E - - - - - - - E F S L P - P Q P L I
Sb016685_Sorbi1    D L H V A E P S S P A R F V L H G Y G A T E P S E Q Y W P A A A A T Y S H S Q S Q H G A A S A A T D D E L P S P T S A V
 
AT1G43160.1     T G S A V T K E C E S S M S L E - - R P K K Y R G V R Q R P W G K W A A E I R D P H K A T R V W L G T F E T A E A A A R
Sb016685_Sorbi1    G G S T S T S T S S R A R A A A P V R N K R Y R G V R Q R P W G K W A A E I R D P H K A A R V W L G T F D T A E D A A R
 
AT1G43160.1     A Y D A A A L R F R G S K A K L N F P E N V - - - - - - - - - - G T Q T I Q R N S H F L Q N S M Q P S L T Y I D Q C P T
Sb016685_Sorbi1    A Y D A A A L R F R G S R A K L N F P E S A T L P F S T P P P P A T A T - - - H H H Q Q Q P P L T P A S R A L T T T P P
 
AT1G43160.1     L L S Y S R C M E Q Q Q P L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016685_Sorbi1    P L A R P E A L L E S Q A L P A G G G S R D P Y L D Y A R F L Q S G G D G G G G D P S A S S G T P A P S V T L P P P P A
 
AT1G43160.1     - - - - - - - - - - - - - - - - - - - - V G M L Q P - - - - - - - T E E E N H - - - - - - - F F E K - - - - - P W T E Y
Sb016685_Sorbi1    V P A S A A A A Y G F G G E G E T L R G Y G Y L S P P P Q R Q S S A E P G N H P P A A W A G F Y S S S Y P P P P W P - W
 
AT1G43160.1     D Q Y N Y S S F G
Sb016685_Sorbi1    D Q S G - - - - -
 
0