fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G43640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032660 ACQGAALRLSLAFLDS in 197/692 AT1G25280.1 1st_not 0.626076260 II
SPLIMGLSLMLAGQAE in 382/692
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G43640.1     ---MSFLSIVRDVRDTVGSFSRRSFDVRV---SNGTTHQRSKSHGVEAHIEDL-IVIKNT
Sb032660_Sorbi1 LAKMSFRSIVRDVRDSFGSLSRRSFEVTIAGLSGLTVHHRGKSQSTVHEVCDTDLIIQES
                   *** ********:.**:*****:* :   *. *.*:*.**:..  .: *  ::*:::

AT1G43640.1     RWANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFP
Sb032660_Sorbi1 RWANLPPELLRDVIRRLEASESTWPNRKHVVSCAAVCRAWREMCREIVLSPEFCGKLTFP
                ******. *****:::*: ****** **:**:**.**::** **::** ****.******

AT1G43640.1     VSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVI
Sb032660_Sorbi1 VSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLMENGKFLLSAKRNRKTTCTEYVI
                ***********:***:******: ******.**.*:*:*.*********.*::* *****

AT1G43640.1     SMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKV
Sb032660_Sorbi1 SMDAENISRSSSTYIGKLRSNFLGTKFMISDTQPPYNGAVVPHAGRTSRRFNSKKVSPKV
                ****:*************:********:: ** *.**.: :  . . ** **********

AT1G43640.1     PSGSYNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPE-FLQRSLDESFR
Sb032660_Sorbi1 PTGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASAVEPGGIVPGQPEQILPRALEESFR
                *:*************:*********:*:*****: *:**** **.*** :* *:*:****

AT1G43640.1     SIGS---SKIVNHSGDFTRPK------------------EEEG--KVRPLVLKTKPPRWL
Sb032660_Sorbi1 STTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGAAIAGDEEGQNKERPLVLRNKAPRWH
                *  *   *.*:::* **: .:                  :***  * *****:.*.*** 

AT1G43640.1     QPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKI
Sb032660_Sorbi1 EQLQCWCLNFRGRVTIASVKNFQLIAAPSPAP-------APAARAPTPSSQPVPQDQDKI
                : *:******:****:********::*.:  *       * *:*.. ...**  .::***

AT1G43640.1     ILHFGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKLACE
Sb032660_Sorbi1 ILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
                **:****.********************.**:********
BoxShade v3.31 C (beta, 970507) Output
AT1G43640.1     - - - M S F L S I V R D V R D T V G S F S R R S F D V R V - - - S N G T T H Q R S K S H G V E A H I E D L - I V I K N T
Sb032660_Sorbi1    L A K M S F R S I V R D V R D S F G S L S R R S F E V T I A G L S G L T V H H R G K S Q S T V H E V C D T D L I I Q E S
 
AT1G43640.1     R W A N L P A A L L R D V M K K L D E S E S T W P A R K Q V V A C A G V C K T W R L M C K D I V K S P E F S G K L T F P
Sb032660_Sorbi1    R W A N L P P E L L R D V I R R L E A S E S T W P N R K H V V S C A A V C R A W R E M C R E I V L S P E F C G K L T F P
 
AT1G43640.1     V S L K Q P G P R D G I I Q C Y I K R D K S N M T Y H L Y L S L S P A I L V E S G K F L L S A K R S R R A T Y T E Y V I
Sb032660_Sorbi1    V S L K Q P G P R D G M I Q C F I K R D K S K S T Y H L Y L C L S T A V L M E N G K F L L S A K R N R K T T C T E Y V I
 
AT1G43640.1     S M D A D N I S R S S S T Y I G K L K S N F L G T K F I V Y D T A P A Y N S S Q I L S P P N R S R S F N S K K V S P K V
Sb032660_Sorbi1    S M D A E N I S R S S S T Y I G K L R S N F L G T K F M I S D T Q P P Y N G A V V P H A G R T S R R F N S K K V S P K V
 
AT1G43640.1     P S G S Y N I A Q V T Y E L N L L G T R G P R R M N C I M H S I P S L A L E P G G T V P S Q P E - F L Q R S L D E S F R
Sb032660_Sorbi1    P T G S Y N I A Q V T Y E L N V L G T R G P R R M H C V M H S I P A S A V E P G G I V P G Q P E Q I L P R A L E E S F R
 
AT1G43640.1     S I G S - - - S K I V N H S G D F T R P K - - - - - - - - - - - - - - - - - - E E E G - - K V R P L V L K T K P P R W L
Sb032660_Sorbi1    S T T S F S K S S I M D R S M D F S S S R D F S S A R F S D I A G G A A I A G D E E G Q N K E R P L V L R N K A P R W H
 
AT1G43640.1     Q P L R C W C L N F K G R V T V A S V K N F Q L M S A A T V Q P G S G S D G G A L A T R P S L S P Q Q P E Q S N H D K I
Sb032660_Sorbi1    E Q L Q C W C L N F R G R V T I A S V K N F Q L I A A P S P A P - - - - - - - A P A A R A P T P S S Q P V P Q D Q D K I
 
AT1G43640.1     I L H F G K V G K D M F T M D Y R Y P L S A F Q A F A I S L S T F D T K L A C E
Sb032660_Sorbi1    I L Q F G K V A K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
 
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