fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G43700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038481 TVENKELKLRLQAMEQ in 243/340 AT1G43700.1 1st_1st 0.441515650 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G43700.1     MEGGGRGPNQTILSEIEHMPEAPRQRISHHRRARSETFFSGESIDDLLLFDPSDIDFSSL
pt038481_POPTR_ MDPTKFRGKQPMTVDIEQMPETP-YRGSHHRRAHSDTSF---RFDDLLFLDASDFDLSSL
                *:      :*.:  :**:***:*  * ******:*:* *    :****::*.**:*:***

AT1G43700.1     DFLNAP-----------PPPQQSQQQPQASPMSVD--SEETSSNGVVPPNSLPPKPEARF
pt038481_POPTR_ DDLPTPNTTTTTTTTTHPPP--------AAPMAVDSLSDDSTSNG----QNQKPKPV---
                * * :*           ***        *:**:**  *::::***    :.  ***    

AT1G43700.1     GRHVRSFSVDSDFFDDLGV-----TEEKFIATS-SGEKKKGNHHHSRSNSMDGEMSSASF
pt038481_POPTR_ -NHLRSLSMDSDFFDGLGLGAAGGADEKFDGKAVAGEKRAANPHHRHSYSMDG-----SF
                 .*:**:*:******.**:     ::*** ..: :***: .* ** :* ****     **

AT1G43700.1     NIESILASVSGKDSGKKNMGMGGDRLAELALLDPKRAKRILANRQSAARSKERKIRYTGE
pt038481_POPTR_ EVDSIMI-----DGVKK--AMAPDRLAELSLIDPKRAKRILANRQSAARSKERKIRYTGE
                :::**:      *. **  .*. ******:*:****************************

AT1G43700.1     LERKVQTLQNEATTLSAQVTMLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRDE
pt038481_POPTR_ LERKVQTLQTEATTLSAQVTMLQRDTTGLTVENKELKLRLQAMEQQAHLRDALNEALREE
                *********.**************.*: *..***.**:****:****.**********:*

AT1G43700.1     LNRLKVVAGEIPQGNGNSYNRA---QFSSQQSAMNQFGNKTNQQ-----------MSTNG
pt038481_POPTR_ VQRLKIATGQVPAVNGNPFNRGLPPQFSSHQ-GLQTFGNQQAQQQLHMPQPSTTGQTHNG
                ::***:.:*::*  ***.:**.   ****:* .:: ***:  **            : **

AT1G43700.1     QPSLPSYMDFTKRG
pt038481_POPTR_ QPH-PSFSNFSQRV
                **  **: :*::*
BoxShade v3.31 C (beta, 970507) Output
AT1G43700.1     M E G G G R G P N Q T I L S E I E H M P E A P R Q R I S H H R R A R S E T F F S G E S I D D L L L F D P S D I D F S S L
pt038481_POPTR_    M D P T K F R G K Q P M T V D I E Q M P E T P - Y R G S H H R R A H S D T S F - - - R F D D L L F L D A S D F D L S S L
 
AT1G43700.1     D F L N A P - - - - - - - - - - - P P P Q Q S Q Q Q P Q A S P M S V D - - S E E T S S N G V V P P N S L P P K P E A R F
pt038481_POPTR_    D D L P T P N T T T T T T T T T H P P P - - - - - - - - A A P M A V D S L S D D S T S N G - - - - Q N Q K P K P V - - -
 
AT1G43700.1     G R H V R S F S V D S D F F D D L G V - - - - - T E E K F I A T S - S G E K K K G N H H H S R S N S M D G E M S S A S F
pt038481_POPTR_    - N H L R S L S M D S D F F D G L G L G A A G G A D E K F D G K A V A G E K R A A N P H H R H S Y S M D G - - - - - S F
 
AT1G43700.1     N I E S I L A S V S G K D S G K K N M G M G G D R L A E L A L L D P K R A K R I L A N R Q S A A R S K E R K I R Y T G E
pt038481_POPTR_    E V D S I M I - - - - - D G V K K - - A M A P D R L A E L S L I D P K R A K R I L A N R Q S A A R S K E R K I R Y T G E
 
AT1G43700.1     L E R K V Q T L Q N E A T T L S A Q V T M L Q R G T S E L N T E N K H L K M R L Q A L E Q Q A E L R D A L N E A L R D E
pt038481_POPTR_    L E R K V Q T L Q T E A T T L S A Q V T M L Q R D T T G L T V E N K E L K L R L Q A M E Q Q A H L R D A L N E A L R E E
 
AT1G43700.1     L N R L K V V A G E I P Q G N G N S Y N R A - - - Q F S S Q Q S A M N Q F G N K T N Q Q - - - - - - - - - - - M S T N G
pt038481_POPTR_    V Q R L K I A T G Q V P A V N G N P F N R G L P P Q F S S H Q - G L Q T F G N Q Q A Q Q Q L H M P Q P S T T G Q T H N G
 
AT1G43700.1     Q P S L P S Y M D F T K R G
pt038481_POPTR_    Q P H - P S F S N F S Q R V
 
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