fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G43950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030681 not found in 610aa AT4G23980.2 1st_not 0.529670329 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G43950.1     ----------------MESGNVVNVQSELSGIIDGSKSYMYEQLWKLCAGPLCDIPKLGE
pt030681_POPTR_ MMAMNRGIGGGGGGGSLSQGN-----SEGCGGDD-----LYTELWKACAGPLVDVPKRGE
                                :..**     ** .*  *     :* :*** ***** *:** **

AT1G43950.1     KVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMP
pt030681_POPTR_ RVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVIHTQLLAEQDTDEVYAQITLIP
                :*:******:* :****.:***:  *  :****: ****  :* .*:::**.*.:***:*

AT1G43950.1     DTTQVVIPTENENQF----RPIVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQP
pt030681_POPTR_ ESDQIE-PTSPDSSSSEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQP
                :: *:  **. :..     ** *:** *********::* ***  *** ********:**

AT1G43950.1     IPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGEL
pt030681_POPTR_ TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGEL
                 *:***:* **** :***** :*  ** .  ****.:*.***:**.** :** ***.***

AT1G43950.1     RVGIR-------------------------------------------------------
pt030681_POPTR_ RVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVSTLTLFVVYYKPRTSQFIISLNKY
                ***:*                                                       

AT1G43950.1     ------------------------------------------------------------
pt030681_POPTR_ LEAVSNKFVVGMRFKMRFEGEDSPDRRFSGTIVGVEDFSPHWNDSKWRSLKVQWDEPAPI
                                                                            

AT1G43950.1     ------------------------------------------------------------
pt030681_POPTR_ PRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRPRPPFEIPALGYSTPLSSKSKNDAILDP
                                                                            

AT1G43950.1     ------------------------------------------------------------
pt030681_POPTR_ SDKGRKSEVPTSYRLFGIDLVNHSSSSTPIEVPAQLMSICSGATEGHVLGTLSAVDSDQK
                                                                            

AT1G43950.1     ------------------------------------------------------------
pt030681_POPTR_ SEVSKEQKPEQLQKSPKEIQSKQSSTSTRSRTKVQMQGIAVGRAVDLTMLKGYSQLIDEL
                                                                            

AT1G43950.1     ------------------------------------------------------------
pt030681_POPTR_ EQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNMVRRIYICSSQDVKRMGPGS
                                                                            

AT1G43950.1     ---------------------
pt030681_POPTR_ KLPKLPIKGEGTVLSSDSAEN
BoxShade v3.31 C (beta, 970507) Output
AT1G43950.1     - - - - - - - - - - - - - - - - M E S G N V V N V Q S E L S G I I D G S K S Y M Y E Q L W K L C A G P L C D I P K L G E
pt030681_POPTR_    M M A M N R G I G G G G G G G S L S Q G N - - - - - S E G C G G D D - - - - - L Y T E L W K A C A G P L V D V P K R G E
 
AT1G43950.1     K V Y Y F P Q G H I E L V E A S T R E E L N E L Q P N C D L P S K L Q C R V I A I H L K V E N N S D E T Y V E I T L M P
pt030681_POPTR_    R V F Y F P Q G H M E Q L E A S T N Q E L N Q R V P L F N L P S K I L C R V I H T Q L L A E Q D T D E V Y A Q I T L I P
 
AT1G43950.1     D T T Q V V I P T E N E N Q F - - - - R P I V N S F T K V L T A S D T S A Q G E F S V P C K H A I E C L P P L D M S Q P
pt030681_POPTR_    E S D Q I E - P T S P D S S S S E P P R P T V H S F C K V L T A S D T S T H G G F S V L R K H A T E C L P P L D M T Q P
 
AT1G43950.1     I P A Q E L I A I D L H G N Q W R F K H S Y R - V P R G D - - T T G W N A F T T S K K L V V G D V I V F A R G E T G E L
pt030681_POPTR_    T P T Q E L V A K D L H G Y E W R F K H I F R G Q P R R H L L T T G W S T F V T S K R L V A G D S F V F L R G E N G E L
 
AT1G43950.1     R V G I R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    R V G V R R V A C Q Q S S M P S S V I S S Q S M H L G V L A T A S H A V S T L T L F V V Y Y K P R T S Q F I I S L N K Y
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    L E A V S N K F V V G M R F K M R F E G E D S P D R R F S G T I V G V E D F S P H W N D S K W R S L K V Q W D E P A P I
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    P R P D R V S P W E I E P C V A S V P T N L S Q P V T Q K N K R P R P P F E I P A L G Y S T P L S S K S K N D A I L D P
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    S D K G R K S E V P T S Y R L F G I D L V N H S S S S T P I E V P A Q L M S I C S G A T E G H V L G T L S A V D S D Q K
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    S E V S K E Q K P E Q L Q K S P K E I Q S K Q S S T S T R S R T K V Q M Q G I A V G R A V D L T M L K G Y S Q L I D E L
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    E Q L F D I K G Q L H P R D K W E I V Y T D D E G D M M L V G D D P W P E F C N M V R R I Y I C S S Q D V K R M G P G S
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - -
pt030681_POPTR_    K L P K L P I K G E G T V L S S D S A E N
 
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