fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G43950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026403 not found in 898aa AT5G62000.3 1st_not 0.472527472 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G43950.1     ---------------MESGNVVNVQSELSGIIDGSKSYMYEQLWKLCAGPLCDIPKLGEK
Sb026403_Sorbi1 GFPRPPPPPLPDPRQMPPAAAMALPSQAP---SNSGDPLYPELWRACAGPLVTVPRVGDL
                               * .. .: : *: .   ..* . :* :**: *****  :*::*: 

AT1G43950.1     VYYFPQGHIELVEASTREELNELQPN----CDLPSKLQCRVIAIHLKVENNSDETYVEIT
Sb026403_Sorbi1 VFYFPQGHIEQVEAS----MNQVAGNQMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIM
                *:******** ****    :*::  *     ****** ***: :.**.*.::**.*.:* 

AT1G43950.1     LMPDTTQVVIPTENENQF-----RPIVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLD
Sb026403_Sorbi1 LMPEPEQTDVAAEKASSASAASPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLD
                ***:. *. :.:*: ..      ** *.** *.*******::* ***  :** *******

AT1G43950.1     MSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGE
Sb026403_Sorbi1 MTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE
                *:*. *:***:* **** :***:* :*  ** .   :**..*.:**:**.**.::* ***

AT1G43950.1     TGELRVGIR---------------------------------------------------
Sb026403_Sorbi1 NGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFI
                .******:*                                                   

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 IPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRW
                                                                            

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 DEPSTIPRPDRVSPWKIEPASSPPVNPLPLSSRVKRPRQNAPPPSPEASVLTKESAAKID
                                                                            

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 IDSAQTQHQNSVLQGQEQMTLRNNLTESNDSDSTVQKPMMWSPSPNGKAHTNFQQRPAMD
                                                                            

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 SWMPMGRRETDFKDSRSAFKDARTASQSFRDTQGFFMQAYDDNHHRLSFNNQFQDQGSAH
                                                                            

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 RFADPYFYMAQQPSLTVESSTRTQTANNDLRFWGDQNSIYGNPGDQQQQGFSFGQNPSSW
                                                                            

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 LNQPFPQVEQPRVVRPHATVAPFDLEKTREGSGFKIFGFQVDTTSPSPAQLSSPLCAIRE
                                                                            

AT1G43950.1     ------------------------------------------------------------
Sb026403_Sorbi1 HVVQTRPSAPVNELQPVQNECLPEGSVSTAGTATENEKNIQQAQPSSKDIQSKSQGASTR
                                                                            

AT1G43950.1     ------
Sb026403_Sorbi1 SCTKVV
BoxShade v3.31 C (beta, 970507) Output
AT1G43950.1     - - - - - - - - - - - - - - - M E S G N V V N V Q S E L S G I I D G S K S Y M Y E Q L W K L C A G P L C D I P K L G E K
Sb026403_Sorbi1    G F P R P P P P P L P D P R Q M P P A A A M A L P S Q A P - - - S N S G D P L Y P E L W R A C A G P L V T V P R V G D L
 
AT1G43950.1     V Y Y F P Q G H I E L V E A S T R E E L N E L Q P N - - - - C D L P S K L Q C R V I A I H L K V E N N S D E T Y V E I T
Sb026403_Sorbi1    V F Y F P Q G H I E Q V E A S - - - - M N Q V A G N Q M R L Y D L P S K L L C R V L N V E L K A E T D T D E V Y A Q I M
 
AT1G43950.1     L M P D T T Q V V I P T E N E N Q F - - - - - R P I V N S F T K V L T A S D T S A Q G E F S V P C K H A I E C L P P L D
Sb026403_Sorbi1    L M P E P E Q T D V A A E K A S S A S A A S P R P A V R S F C K T L T A S D T S T H G G F S V L R R H A D E C L P P L D
 
AT1G43950.1     M S Q P I P A Q E L I A I D L H G N Q W R F K H S Y R - V P R G D - - T T G W N A F T T S K K L V V G D V I V F A R G E
Sb026403_Sorbi1    M T Q S P P T Q E L V A K D L H G M E W R F R H I F R G Q P R R H L L Q S G W S V F V S S K R L V A G D A F I F L R G E
 
AT1G43950.1     T G E L R V G I R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    N G E L R V G V R R A M R Q L S N V P S S V I S S Q S M H L G V L A T A W H A I N T K S M F T V Y Y K P R T S P S E F I
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    I P Y D Q Y M E S V K N N Y S I G M R F R M R F E G E E A P E Q R F T G T I V G C E N L D P L W P D S S W R Y L K V R W
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    D E P S T I P R P D R V S P W K I E P A S S P P V N P L P L S S R V K R P R Q N A P P P S P E A S V L T K E S A A K I D
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    I D S A Q T Q H Q N S V L Q G Q E Q M T L R N N L T E S N D S D S T V Q K P M M W S P S P N G K A H T N F Q Q R P A M D
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    S W M P M G R R E T D F K D S R S A F K D A R T A S Q S F R D T Q G F F M Q A Y D D N H H R L S F N N Q F Q D Q G S A H
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    R F A D P Y F Y M A Q Q P S L T V E S S T R T Q T A N N D L R F W G D Q N S I Y G N P G D Q Q Q Q G F S F G Q N P S S W
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    L N Q P F P Q V E Q P R V V R P H A T V A P F D L E K T R E G S G F K I F G F Q V D T T S P S P A Q L S S P L C A I R E
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026403_Sorbi1    H V V Q T R P S A P V N E L Q P V Q N E C L P E G S V S T A G T A T E N E K N I Q Q A Q P S S K D I Q S K S Q G A S T R
 
AT1G43950.1     - - - - - -
Sb026403_Sorbi1    S C T K V V
 
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