fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G43950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006485 not found in 691aa AT4G23980.1 1st_not 0.514285714 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G43950.1     --MESGNVVNVQSELSGIIDGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVE
gm006485_Glyma0 MLSRAAN-----GEVAGSGYSGEDEMYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLE
                   .:.*     .*::*   ..:. *** *** ***** *:*::*::*:******:* :*

AT1G43950.1     ASTREELNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQ
gm006485_Glyma0 ASTNQELNQRIPLLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPES----------NQ
                ***.:***:  *  .**:*: ***: :** .*:::**.*.:***:*::          **

AT1G43950.1     FRPI-------------VNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQE
gm006485_Glyma0 DEPMNPDPCTAEPPRAPVHSFSKVLTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQE
                 .*:             *:**:*********::* ***  ***:****.****** *:**

AT1G43950.1     LIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR
gm006485_Glyma0 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVR
                *:* **** :***** :*  ** .  ****.:*.***:**.**.:** **:.******:*

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 RLARQASSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAMN
                                                                            

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 RFSVGMRLKMRFEGDDSAETDKRFSGTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPD
                                                                            

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 RVSPWEIEPFVASASTPSVQPTMVKTKRPRPPSETPDVDTTSAASVFWDAGLQQADMAQK
                                                                            

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 NVLAESKRNDSTGTWHHMQTDMNSKSNSGNAMLRNQTEGSWLSSPHSSCPSHLFQDATDD
                                                                            

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 SKSVSAWPVSKPHSSRLNNDHVLDQVDKESKVETATSYRLFGIDLIDHSRNSPSVEKASA
                                                                            

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 QAGNAPKVTTEGCTSTLTRTDAGHLSDVPMASSKERKQEQQQVSPKETQSKQICRSRTKV
                                                                            

AT1G43950.1     ------------------------------------------------------------
gm006485_Glyma0 QMQGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDP
                                                                            

AT1G43950.1     ----------------------------------------------
gm006485_Glyma0 WPEFCNMVRRIFICSSQDVKKMSCGSKLPISSVEDGTVISSDTTET
BoxShade v3.31 C (beta, 970507) Output
AT1G43950.1     - - M E S G N V V N V Q S E L S G I I D G S K S Y M Y E Q L W K L C A G P L C D I P K L G E K V Y Y F P Q G H I E L V E
gm006485_Glyma0    M L S R A A N - - - - - G E V A G S G Y S G E D E M Y E P L W K G C A G P L V D V P R V G Q R V F Y F P Q G H M E Q L E
 
AT1G43950.1     A S T R E E L N E L Q P N C D L P S K L Q C R V I A I H L K V E N N S D E T Y V E I T L M P D T T Q V V I P T E N E N Q
gm006485_Glyma0    A S T N Q E L N Q R I P L L K L P T K I L C R V V N V H L L A E Q E T D E V Y A Q I T L V P E S - - - - - - - - - - N Q
 
AT1G43950.1     F R P I - - - - - - - - - - - - - V N S F T K V L T A S D T S A Q G E F S V P C K H A I E C L P P L D M S Q P I P A Q E
gm006485_Glyma0    D E P M N P D P C T A E P P R A P V H S F S K V L T A S D T S T H G G F S V L R K H A M E C L P A L D M S Q P T P T Q E
 
AT1G43950.1     L I A I D L H G N Q W R F K H S Y R - V P R G D - - T T G W N A F T T S K K L V V G D V I V F A R G E T G E L R V G I R
gm006485_Glyma0    L V A K D L H G Y E W R F K H I F R G Q P R R H L L T T G W S T F V T S K R L V A G D T F V F L R G D N G E L R V G V R
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    R L A R Q A S S M P S S V I S S Q S M H L G V L A T A S H A V A T Q T L F V V Y Y K P R T S Q F I I S V N K Y L E A M N
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    R F S V G M R L K M R F E G D D S A E T D K R F S G T I V G V E D I S P H W V N S K W R S L K V Q W D E P A A V P R P D
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    R V S P W E I E P F V A S A S T P S V Q P T M V K T K R P R P P S E T P D V D T T S A A S V F W D A G L Q Q A D M A Q K
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    N V L A E S K R N D S T G T W H H M Q T D M N S K S N S G N A M L R N Q T E G S W L S S P H S S C P S H L F Q D A T D D
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    S K S V S A W P V S K P H S S R L N N D H V L D Q V D K E S K V E T A T S Y R L F G I D L I D H S R N S P S V E K A S A
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    Q A G N A P K V T T E G C T S T L T R T D A G H L S D V P M A S S K E R K Q E Q Q Q V S P K E T Q S K Q I C R S R T K V
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    Q M Q G V A V G R A V D L T M L D G Y D Q L I N E L E E M F D I K G Q L Q H R N K W E I V F T D D E G D M M L V G D D P
 
AT1G43950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm006485_Glyma0    W P E F C N M V R R I F I C S S Q D V K K M S C G S K L P I S S V E D G T V I S S D T T E T
 
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