fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G44830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010883 not found in 232aa AT1G44830.1 1st_1st 0.389570552 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G44830.1     MVKTLQKTPKRMSSPSS-----SSSSSSSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQ
gm010883_Glyma0 MVKLEHKIK---TEPSSKEMRLSSLSSSASTSSDCKKKKYKGVRMRSWGSWVSEIRAPNQ
                ***  :*     :.***     ** ***:::**. : ***********************

AT1G44830.1     KTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEISTSLYHIINNGDNNNDMSPKS
gm010883_Glyma0 KTRIWLGSYSTPEAAARAYDAALLCLKGSSA-NLNFP-LSSSQQYIPGEA----VMSPKS
                ***********.******************* ***** :*:*  :* .:.     *****

AT1G44830.1     IQRVAAAAA-----AANTDPS------SSSVSTSSPLLSSPSEDLYDVVSM---------
gm010883_Glyma0 IQRVAAAAANSFIDNANTPPSPPPASNPSSLASSPSLVSSPSDQIDDNASLISSFEAYTS
                *********      *** **      .**:::*..*:****::: * .*:         

AT1G44830.1     -SQYDQQVSLSESSSWYNCFDG------DDQFMFINGVSAPYLTTSLSDDFFEEGDIRLW
gm010883_Glyma0 CDQANQPMTMNVMEPWYTFADGLQSPKYVDQML--SGAFFDFDSSHLFDDLYEESDIRLW
                 .* :* :::.  ..**.  **       **::  .*.   : :: * **::**.*****

AT1G44830.1     NFC
gm010883_Glyma0 SFC
                .**
BoxShade v3.31 C (beta, 970507) Output
AT1G44830.1     M V K T L Q K T P K R M S S P S S - - - - - S S S S S S S T S S S S I R M K K Y K G V R M R S W G S W V S E I R A P N Q
gm010883_Glyma0    M V K L E H K I K - - - T E P S S K E M R L S S L S S S A S T S S D C K K K K Y K G V R M R S W G S W V S E I R A P N Q
 
AT1G44830.1     K T R I W L G S Y S T A E A A A R A Y D A A L L C L K G S S A N N L N F P E I S T S L Y H I I N N G D N N N D M S P K S
gm010883_Glyma0    K T R I W L G S Y S T P E A A A R A Y D A A L L C L K G S S A - N L N F P - L S S S Q Q Y I P G E A - - - - V M S P K S
 
AT1G44830.1     I Q R V A A A A A - - - - - A A N T D P S - - - - - - S S S V S T S S P L L S S P S E D L Y D V V S M - - - - - - - - -
gm010883_Glyma0    I Q R V A A A A A N S F I D N A N T P P S P P P A S N P S S L A S S P S L V S S P S D Q I D D N A S L I S S F E A Y T S
 
AT1G44830.1     - S Q Y D Q Q V S L S E S S S W Y N C F D G - - - - - - D D Q F M F I N G V S A P Y L T T S L S D D F F E E G D I R L W
gm010883_Glyma0    C D Q A N Q P M T M N V M E P W Y T F A D G L Q S P K Y V D Q M L - - S G A F F D F D S S H L F D D L Y E E S D I R L W
 
AT1G44830.1     N F C
gm010883_Glyma0    S F C
 
0