fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 not_not 0.444805194 III
Pt036987 not found in 181aa AT5G67190.1 not_not 0.438311688 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G46768.1     MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY
pt001651_POPTR_ MESGVDKEMATRKR--------GGMGSERQYKGIRMRKWGKWVAEIREPNKRSRIWLGSY
pt036987_POPTR_ MESGVDKDMATRKR--------GGMESERQYKGIRMRKWGKWVAEIREPNKRSRIWLGSY
                **   ::.   ::*        . : :.: *:*** ******************:*****

AT1G46768.1     TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR
pt001651_POPTR_ STPVAAARAYDTAVFYLRGPSARLNFPE-FLAGENFSCGGSYGDMSAASIRKRATEVGAR
pt036987_POPTR_ STPVAAARAYDTAVFYLRGPSARLNFPE-VLAAEGFGGGGSCGDMSAASIRKRATEVGAH
                :* :*******.***************: .*  *..  ..: .**.** **::*:****:

AT1G46768.1     VDALL---------------------ASAAPSMAHSTPPVI-------KP-DLNQIPESG
pt001651_POPTR_ VDAFETALNHHHHR----HHDDRQRNSSNSTSSNDNNETVVDSRELKSRPVDLNKVPDPE
pt036987_POPTR_ VDAIETALNHHHHHHHHLHHDDRQRNSNNSSSSNDNNETVVDSRELKPRPVDLNKVPDPE
                ***:                      :. :.*  ... .*:       :* ***::*:. 

AT1G46768.1     DI------------------
pt001651_POPTR_ DSDGDEWERSLATGGNPMGC
pt036987_POPTR_ DSDGDEWKRS----------
                *
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E R E Q E E S T M R K R R Q P P Q E E V P N H V A T R K P Y R G I R R R K W G K W V A E I R E P N K R S R L W L G S Y
pt001651_POPTR_    M E S G V D K E M A T R K R - - - - - - - - G G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S Y
pt036987_POPTR_    M E S G V D K D M A T R K R - - - - - - - - G G M E S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S Y
 
AT1G46768.1     T T D I A A A R A Y D V A V F Y L R G P S A R L N F P D L L L Q E E D H L S A A T T A D M P A A L I R E K A A E V G A R
pt001651_POPTR_    S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E - F L A G E N F S C G G S Y G D M S A A S I R K R A T E V G A R
pt036987_POPTR_    S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E - V L A A E G F G G G G S C G D M S A A S I R K R A T E V G A H
 
AT1G46768.1     V D A L L - - - - - - - - - - - - - - - - - - - - - A S A A P S M A H S T P P V I - - - - - - - K P - D L N Q I P E S G
pt001651_POPTR_    V D A F E T A L N H H H H R - - - - H H D D R Q R N S S N S T S S N D N N E T V V D S R E L K S R P V D L N K V P D P E
pt036987_POPTR_    V D A I E T A L N H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T V V D S R E L K P R P V D L N K V P D P E
 
AT1G46768.1     D I - - - - - - - - - - - - - - - - - -
pt001651_POPTR_    D S D G D E W E R S L A T G G N P M G C
pt036987_POPTR_    D S D G D E W K R S - - - - - - - - - -
 
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