fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016489 not found in 155aa AT1G46768.1 1st_1st 0.522727272 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G46768.1     ME-----------REQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREP
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQN------QEKPYRGIRMRKWGKWVAEIREP
                **            . . :* .**::. *::       .******* *************

AT1G46768.1     NKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAAL
pt016489_POPTR_ NKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQEDE------LRDVSAAS
                *****:*****:* ********.*****************: **::        *:.** 

AT1G46768.1     IREKAAEVGARVDALLASAAPSMAHSTPP----VI---KPDLNQIPESGDI-
pt016489_POPTR_ IRKKATEVGAKVDAL-----QTAVHASPEDNSRVLLSEKPDLNKFPENSDEE
                **:**:****:****      : .*::*     *:   *****::**..*
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E - - - - - - - - - - - R E Q E E S T M R K R R Q P P Q E E V P N H V A T R K P Y R G I R R R K W G K W V A E I R E P
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q N - - - - - - Q E K P Y R G I R M R K W G K W V A E I R E P
 
AT1G46768.1     N K R S R L W L G S Y T T D I A A A R A Y D V A V F Y L R G P S A R L N F P D L L L Q E E D H L S A A T T A D M P A A L
pt016489_POPTR_    N K R S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E D E - - - - - - L R D V S A A S
 
AT1G46768.1     I R E K A A E V G A R V D A L L A S A A P S M A H S T P P - - - - V I - - - K P D L N Q I P E S G D I -
pt016489_POPTR_    I R K K A T E V G A K V D A L - - - - - Q T A V H A S P E D N S R V L L S E K P D L N K F P E N S D E E
 
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