fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_not 0.438311688 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G46768.1     MEREQEESTMRKRRQPPQ----EEVPNHVATRKP-----------YRGIRRRKWGKWVAE
Os023742_Os06t0 MDR-REATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGGGRQYRGVRMRKWGKWVAE
                *:* :* :.:     ***    :: *  .*.* *           ***:* *********

AT1G46768.1     IREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDLLL----------QEED
Os023742_Os06t0 IREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGRSARLNFPDQLDGAGGGGAGAGGAED
                *********:*****:* :*******.******* ******** *             **

AT1G46768.1     HLSAATTADMPAALIREKAAEVGARVDA---LLASAAP-SMAHSTPP------VIKPDLN
Os023742_Os06t0 H------RELTAAVIRKKAAEVGARVDAQHSVVGAAAPVPLQPPQPPPPQRRRTKNPDLN
                *       ::.**:**:***********   ::.:*** .:  . **      . :****

AT1G46768.1     Q--IPESGDI-
Os023742_Os06t0 REPTPDTSDDE
                :   *::.*
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E R E Q E E S T M R K R R Q P P Q - - - - E E V P N H V A T R K P - - - - - - - - - - - Y R G I R R R K W G K W V A E
Os023742_Os06t0    M D R - R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G G R Q Y R G V R M R K W G K W V A E
 
AT1G46768.1     I R E P N K R S R L W L G S Y T T D I A A A R A Y D V A V F Y L R G P S A R L N F P D L L L - - - - - - - - - - Q E E D
Os023742_Os06t0    I R E P N K R S R I W L G S Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P D Q L D G A G G G G A G A G G A E D
 
AT1G46768.1     H L S A A T T A D M P A A L I R E K A A E V G A R V D A - - - L L A S A A P - S M A H S T P P - - - - - - V I K P D L N
Os023742_Os06t0    H - - - - - - R E L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V P L Q P P Q P P P P Q R R R T K N P D L N
 
AT1G46768.1     Q - - I P E S G D I -
Os023742_Os06t0    R E P T P D T S D D E
 
0