fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019236 not found in 233aa AT2G23340.1 not_not 0.412337662 III
Os019235 not found in 233aa AT2G23340.1 not_not 0.412337662 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G46768.1     MEREQEESTMR-----------------------------KRRQ-------PPQEEVPNH
Os019235_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPLQQQQP--
Os019236_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPLQQQQP--
                *: * ..*: .                             *..*       * *:: *  

AT1G46768.1     VATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARL
Os019235_Os04t0 ---RRQYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARL
Os019236_Os04t0 ---RRQYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARL
                   *: ***:* *************:**:*:*****:* :*******.******* ****

AT1G46768.1     NFPDLL-----LQEEDHLSAATTAD---MPAALIREKAAEVGARVDALLAS--AAPSMAH
Os019235_Os04t0 NFPEEISSLASLSEGGGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGMMVAPTTHH
Os019236_Os04t0 NFPEEISSLASLSEGGGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGMMVAPTTHH
                ***: :     *.* .  * .  .*   :.** **:** ***:***** :.  .**:  *

AT1G46768.1     STP-----------PVIK-------------------------PDLNQI--PESGDI-
Os019235_Os04t0 RERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNPDLNQAPSPENSDAE
Os019236_Os04t0 RERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNPDLNQAPSPENSDAE
                              * ::                         *****   **..*
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E R E Q E E S T M R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K R R Q - - - - - - - P P Q E E V P N H
Os019235_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L Q Q Q Q P - -
Os019236_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L Q Q Q Q P - -
 
AT1G46768.1     V A T R K P Y R G I R R R K W G K W V A E I R E P N K R S R L W L G S Y T T D I A A A R A Y D V A V F Y L R G P S A R L
Os019235_Os04t0    - - - R R Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L
Os019236_Os04t0    - - - R R Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L
 
AT1G46768.1     N F P D L L - - - - - L Q E E D H L S A A T T A D - - - M P A A L I R E K A A E V G A R V D A L L A S - - A A P S M A H
Os019235_Os04t0    N F P E E I S S L A S L S E G G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M M V A P T T H H
Os019236_Os04t0    N F P E E I S S L A S L S E G G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M M V A P T T H H
 
AT1G46768.1     S T P - - - - - - - - - - - P V I K - - - - - - - - - - - - - - - - - - - - - - - - - P D L N Q I - - P E S G D I -
Os019235_Os04t0    R E R Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S G R A K N P D L N Q A P S P E N S D A E
Os019236_Os04t0    R E R Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S G R A K N P D L N Q A P S P E N S D A E
 
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