fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_not 0.438311688 II
Os019236 not found in 233aa AT2G23340.1 not_not 0.412337662 III
Os019235 not found in 233aa AT2G23340.1 not_not 0.412337662 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G46768.1     MERE------------------QEESTMRKRRQPPQ----EEVPNHVATRKP--------
Os023742_Os06t0 -------------------MDRREATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGG
Os019236_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPL--QQQQP
Os019235_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPL--QQQQP
                                         :.:     ..     ::    .*.  *        

AT1G46768.1     ---YRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFP
Os023742_Os06t0 GRQYRGVRMRKWGKWVAEIREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGRSARLNFP
Os019236_Os04t0 RRQYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFP
Os019235_Os04t0 RRQYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFP
                   ***:* *************:**:*:*****:* :*******.******* *******

AT1G46768.1     DLLLQEEDHLSAATTA-------------DMPAALIREKAAEVGARVDALLA---SAAPS
Os023742_Os06t0 D----QLDGAGGGGAGAGGAEDHRE-----LTAAVIRKKAAEVGARVDAQHSVVGAAAPV
Os019236_Os04t0 E----EISSLASLSEG-GGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGM-MVAPT
Os019235_Os04t0 E----EISSLASLSEG-GGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGM-MVAPT
                :    : .  ..   .              :.** **:** ***:****  :    .** 

AT1G46768.1     M----------------AHSTP--------------------PVIKPDLNQ--IPESGDI
Os023742_Os06t0 P------------------LQP-------PQPPPPQRR----RTKNPDLNREPTPDTSDD
Os019236_Os04t0 THHRERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNPDLNQAPSPENSDA
Os019235_Os04t0 THHRERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNPDLNQAPSPENSDA
                                     *                     . :****:   *:..* 

AT1G46768.1     -
Os023742_Os06t0 E
Os019236_Os04t0 E
Os019235_Os04t0 E
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E R E - - - - - - - - - - - - - - - - - - Q E E S T M R K R R Q P P Q - - - - E E V P N H V A T R K P - - - - - - - -
Os023742_Os06t0    - - - - - - - - - - - - - - - - - - - M D R R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G
Os019236_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L - - Q Q Q Q P
Os019235_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L - - Q Q Q Q P
 
AT1G46768.1     - - - Y R G I R R R K W G K W V A E I R E P N K R S R L W L G S Y T T D I A A A R A Y D V A V F Y L R G P S A R L N F P
Os023742_Os06t0    G R Q Y R G V R M R K W G K W V A E I R E P N K R S R I W L G S Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P
Os019236_Os04t0    R R Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P
Os019235_Os04t0    R R Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P
 
AT1G46768.1     D L L L Q E E D H L S A A T T A - - - - - - - - - - - - - D M P A A L I R E K A A E V G A R V D A L L A - - - S A A P S
Os023742_Os06t0    D - - - - Q L D G A G G G G A G A G G A E D H R E - - - - - L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V
Os019236_Os04t0    E - - - - E I S S L A S L S E G - G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M - M V A P T
Os019235_Os04t0    E - - - - E I S S L A S L S E G - G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M - M V A P T
 
AT1G46768.1     M - - - - - - - - - - - - - - - - A H S T P - - - - - - - - - - - - - - - - - - - - P V I K P D L N Q - - I P E S G D I
Os023742_Os06t0    P - - - - - - - - - - - - - - - - - - L Q P - - - - - - - P Q P P P P Q R R - - - - R T K N P D L N R E P T P D T S D D
Os019236_Os04t0    T H H R E R Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S G R A K N P D L N Q A P S P E N S D A
Os019235_Os04t0    T H H R E R Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S G R A K N P D L N Q A P S P E N S D A
 
AT1G46768.1     -
Os023742_Os06t0    E
Os019236_Os04t0    E
Os019235_Os04t0    E
 
0