fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.457792207 II
Sb030094 not found in 461aa AT2G23340.1 not_not 0.405844155 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G46768.1     ---MEREQEES---------------------------------TMRKRRQPPQEEVPNH
Sb030094_Sorbi1 RDGREGSQENHANAKSSCRYHCCCCCCTCLHNPQPPSAGPQVRASEREREKRQRLQQPAK
Sb033446_Sorbi1 ------PHDHH-------------------HHP---------------RRSGNKLLLPNQ
                       ::.                                      *..  :   * :

AT1G46768.1     VAT-----------------RKPYRGIR----------------RRKWG--KWVAEIR--
Sb030094_Sorbi1 AGAHAGR-VPVFQRGVGGRGRGSSSSSRSRCHGSSCGR------RSRRG-----------
Sb033446_Sorbi1 PGGWRGTPLP------SARRRSPRRLPRFRCRPRRCWAPVVERLRRRQGTAEAAAEVEEE
                 .                  * .    *                * : *           

AT1G46768.1     EPNKRS--------------RL----------WL--------------------------
Sb030094_Sorbi1 EDGGGA----GCDGGG----RCGGAAAGVGA-------PAPPAAD-----AAASAVPRRA
Sb033446_Sorbi1 EEEGGSIAAFGCASGASGWRRSASRTSGRGSGWVPTPPPSPPRAPTTRPCSTSAAAPR--
                *    :              *                                       

AT1G46768.1     -------GSYTTDIAAARAYDVAVF-YLRGPSARLNFPDLL---------LQEEDHLSA-
Sb030094_Sorbi1 HAEVGQVGGGDPGAAQAHAHLAGVLRHGRGGGARLRHGRVLPSRPVGAAQLPRRDPLAV-
Sb033446_Sorbi1 -------GSTSPTSSTA-----------------------------------RRWPITPR
                       *.  .  : *                                   ..  ::  

AT1G46768.1     ATTA--------------------------------------------------------
Sb030094_Sorbi1 AVGGRARGRGDRPRRRWWRRRHAVRGVHPEEGHRGGVPRGRAPDRHDGAPAAPPRAPEAP
Sb033446_Sorbi1 ATGTAARGRGSR------------------------------------------------
                *.                                                          

AT1G46768.1     ------DMPAALIREKAAEVGARVDALLASAA---------------------------P
Sb030094_Sorbi1 PPPPPPPPPAAAACPRARGGGAPPAGAEAVAAAASVERARQEPGSKPGAEPRELRRRVTS
Sb033446_Sorbi1 ------PPPSARRRPRSAPASTRSTAALALASLAAVLPLRSRCRPTIAAAPRTPTSTGSP
                        *:*    ::   .:   .  * *:                           .

AT1G46768.1     SMAHSTP---------------PVIKPDLNQI------PESGDI--
Sb030094_Sorbi1 ERASDTARLNVNDDVRYRLFPFPRRRPALQHMPLSSPSPRTYDDPS
Sb033446_Sorbi1 PRTPQTT----SDFVVVLLLPHPSTTLLVLR---QNYSPKG-----
                  : .*.               *     : :       *.
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     - - - M E R E Q E E S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T M R K R R Q P P Q E E V P N H
Sb030094_Sorbi1    R D G R E G S Q E N H A N A K S S C R Y H C C C C C C T C L H N P Q P P S A G P Q V R A S E R E R E K R Q R L Q Q P A K
Sb033446_Sorbi1    - - - - - - P H D H H - - - - - - - - - - - - - - - - - - - H H P - - - - - - - - - - - - - - - R R S G N K L L L P N Q
 
AT1G46768.1     V A T - - - - - - - - - - - - - - - - - R K P Y R G I R - - - - - - - - - - - - - - - - R R K W G - - K W V A E I R - -
Sb030094_Sorbi1    A G A H A G R - V P V F Q R G V G G R G R G S S S S S R S R C H G S S C G R - - - - - - R S R R G - - - - - - - - - - -
Sb033446_Sorbi1    P G G W R G T P L P - - - - - - S A R R R S P R R L P R F R C R P R R C W A P V V E R L R R R Q G T A E A A A E V E E E
 
AT1G46768.1     E P N K R S - - - - - - - - - - - - - - R L - - - - - - - - - - W L - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    E D G G G A - - - - G C D G G G - - - - R C G G A A A G V G A - - - - - - - P A P P A A D - - - - - A A A S A V P R R A
Sb033446_Sorbi1    E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V P T P P P S P P R A P T T R P C S T S A A A P R - -
 
AT1G46768.1     - - - - - - - G S Y T T D I A A A R A Y D V A V F - Y L R G P S A R L N F P D L L - - - - - - - - - L Q E E D H L S A -
Sb030094_Sorbi1    H A E V G Q V G G G D P G A A Q A H A H L A G V L R H G R G G G A R L R H G R V L P S R P V G A A Q L P R R D P L A V -
Sb033446_Sorbi1    - - - - - - - G S T S P T S S T A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R W P I T P R
 
AT1G46768.1     A T T A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    A V G G R A R G R G D R P R R R W W R R R H A V R G V H P E E G H R G G V P R G R A P D R H D G A P A A P P R A P E A P
Sb033446_Sorbi1    A T G T A A R G R G S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G46768.1     - - - - - - D M P A A L I R E K A A E V G A R V D A L L A S A A - - - - - - - - - - - - - - - - - - - - - - - - - - - P
Sb030094_Sorbi1    P P P P P P P P P A A A A C P R A R G G G A P P A G A E A V A A A A S V E R A R Q E P G S K P G A E P R E L R R R V T S
Sb033446_Sorbi1    - - - - - - P P P S A R R R P R S A P A S T R S T A A L A L A S L A A V L P L R S R C R P T I A A A P R T P T S T G S P
 
AT1G46768.1     S M A H S T P - - - - - - - - - - - - - - - P V I K P D L N Q I - - - - - - P E S G D I - -
Sb030094_Sorbi1    E R A S D T A R L N V N D D V R Y R L F P F P R R R P A L Q H M P L S S P S P R T Y D D P S
Sb033446_Sorbi1    P R T P Q T T - - - - S D F V V V L L L P H P S T T L L V L R - - - Q N Y S P K G - - - - -
 
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