fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008859 not found in 160aa AT1G46768.1 not_1st 0.5 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G46768.1     MERE------QEESTMR----KRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPN
gm008859_Glyma0 MEEAGLGDCCSSNSTITRKSDKRKQQHQQQ-------EKPYRGIRMRKWGKWVAEIREPN
                **.       ..:**:     **:*  *::       .******* **************

AT1G46768.1     KRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALI
gm008859_Glyma0 KRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDD-VSTQQQGNMSADSI
                ****:*****:* :*******.***:***********:** *::* :*:   .:*.*  *

AT1G46768.1     REKAAEVGARVDAL---LASAAPSMAHSTPPVI---KPDLNQIPESGDI
gm008859_Glyma0 RKKATQVGARVDALQTALQQSSSSHSANSSHVSSSDKPDLNEYPKPED-
                *:**::********   * .::.* : .:. *    *****: *:. *
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E R E - - - - - - Q E E S T M R - - - - K R R Q P P Q E E V P N H V A T R K P Y R G I R R R K W G K W V A E I R E P N
gm008859_Glyma0    M E E A G L G D C C S S N S T I T R K S D K R K Q Q H Q Q Q - - - - - - - E K P Y R G I R M R K W G K W V A E I R E P N
 
AT1G46768.1     K R S R L W L G S Y T T D I A A A R A Y D V A V F Y L R G P S A R L N F P D L L L Q E E D H L S A A T T A D M P A A L I
gm008859_Glyma0    K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D - V S T Q Q Q G N M S A D S I
 
AT1G46768.1     R E K A A E V G A R V D A L - - - L A S A A P S M A H S T P P V I - - - K P D L N Q I P E S G D I
gm008859_Glyma0    R K K A T Q V G A R V D A L Q T A L Q Q S S S S H S A N S S H V S S S D K P D L N E Y P K P E D -
 
0