fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46768.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014043 not found in 159aa AT5G67190.1 not_not 0.506493506 III
Gm047992 not found in 174aa AT4G36900.1 not_not 0.5 III
Gm011914 not found in 150aa AT5G67190.1 not_not 0.474025974 III
Gm001918 not found in 168aa AT4G36900.1 not_not 0.467532467 III
Gm047356 not found in 147aa AT2G23340.1 not_not 0.457792207 III
Gm029915 not found in 153aa AT2G23340.1 not_not 0.438311688 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G46768.1     MER-EQ-------EESTM--RKRRQPPQEEVPNHVAT---------RKPYRGIRRRKWGK
gm011914_Glyma0 MEG-EGG------------SATRKRGKDGETET-------------TTRYKGIRMRKWGK
gm014043_Glyma0 ME--EAGLGDCCSSNTTI---TRK--------SEKRKQQH---QQQEKPYRGIRMRKWGK
gm029915_Glyma1 MEG-EG---------------RRREGGERETATAAATRKV-VEGADQRRYKGIRMRKWGK
gm047992_Glyma1 ME--ER--DHRCSNNSTMITTTKKKTSRRSPTSDKLKNQHPCEKQAMKPYRGIRMRKWGK
gm001918_Glyma0 MES-EG----------------RREGGERE--TTAATRK--VEGA-ERRYKGIRMRKWGK
gm047356_Glyma1 MEGEEGG------------IATKKRGKEGETE--------------TTRYKGIRMRKWGK
                **  *                 ::                         *:*** *****

AT1G46768.1     WVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEE-DHLSAA
gm011914_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLAAEG----PAA
gm014043_Glyma0 WVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDD----DVS
gm029915_Glyma1 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLIGEG----AAA
gm047992_Glyma1 WVAEIREPNKRSRIWLGSYTTPMAAARAYDTAVFYLRGPTARLNFPELLFQDDQEEGNDS
gm001918_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLVREG----PAA
gm047356_Glyma1 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFHLRGPSARLNFPELVAAEG----PAA
                *************:*****:* :*******.***:****:******:*:  :       :

AT1G46768.1     TTA-----DMPAALIREKAAEVGARVDALLASAAPSMAHSTP----------------PV
gm011914_Glyma0 SDA-----VMSAASIRKKATEVGARVDALHRQ----DPHAPP------------AGEFAD
gm014043_Glyma0 TQQ---QGKMSADSIRKKATQVGARVDALQTAL----QQSSSTHSIS-------SSHVSY
gm029915_Glyma1 LTG---GCDMSAASIRKKASE------------------------LLSASCGGGSGDFAV
gm047992_Glyma1 VQHGAAAGNMSADSIRRKATQVGARVDALQTAL---HHHASSTNSL--------------
gm001918_Glyma0 LVA---GCDMSAASIRKKATEVGARVDALQATL---HHHYVPPRQLLSGG-GGGSGDFPV
gm047356_Glyma1 D--------MSAASIRKKATEVGARVDALHRQ----HPHALP------------AGEFAD
                         *.*  **.**::                                       

AT1G46768.1     IKPDLNQIPESGDI---------
gm011914_Glyma0 R-VDLNKIPEPEN-SDCDYWGGD
gm014043_Glyma0 EKPDLNEYPKPED----------
gm029915_Glyma1 RVVDLNKMPEPES-SDCE-WNVN
gm047992_Glyma1 -KPDLNEFPKLESLQD-------
gm001918_Glyma0 RVVDLNKMPEPES-SDCE-WDVN
gm047356_Glyma1 R-VDLNKMPEPEN-SDCDYWDRD
                   ***: *:  .
BoxShade v3.31 C (beta, 970507) Output
AT1G46768.1     M E R - E Q - - - - - - - E E S T M - - R K R R Q P P Q E E V P N H V A T - - - - - - - - - R K P Y R G I R R R K W G K
gm011914_Glyma0    M E G - E G G - - - - - - - - - - - - S A T R K R G K D G E T E T - - - - - - - - - - - - - T T R Y K G I R M R K W G K
gm014043_Glyma0    M E - - E A G L G D C C S S N T T I - - - T R K - - - - - - - - S E K R K Q Q H - - - Q Q Q E K P Y R G I R M R K W G K
gm029915_Glyma1    M E G - E G - - - - - - - - - - - - - - - R R R E G G E R E T A T A A A T R K V - V E G A D Q R R Y K G I R M R K W G K
gm047992_Glyma1    M E - - E R - - D H R C S N N S T M I T T T K K K T S R R S P T S D K L K N Q H P C E K Q A M K P Y R G I R M R K W G K
gm001918_Glyma0    M E S - E G - - - - - - - - - - - - - - - - R R E G G E R E - - T T A A T R K - - V E G A - E R R Y K G I R M R K W G K
gm047356_Glyma1    M E G E E G G - - - - - - - - - - - - I A T K K R G K E G E T E - - - - - - - - - - - - - - T T R Y K G I R M R K W G K
 
AT1G46768.1     W V A E I R E P N K R S R L W L G S Y T T D I A A A R A Y D V A V F Y L R G P S A R L N F P D L L L Q E E - D H L S A A
gm011914_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L A A E G - - - - P A A
gm014043_Glyma0    W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D - - - - D V S
gm029915_Glyma1    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L I G E G - - - - A A A
gm047992_Glyma1    W V A E I R E P N K R S R I W L G S Y T T P M A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D Q E E G N D S
gm001918_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L V R E G - - - - P A A
gm047356_Glyma1    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F H L R G P S A R L N F P E L V A A E G - - - - P A A
 
AT1G46768.1     T T A - - - - - D M P A A L I R E K A A E V G A R V D A L L A S A A P S M A H S T P - - - - - - - - - - - - - - - - P V
gm011914_Glyma0    S D A - - - - - V M S A A S I R K K A T E V G A R V D A L H R Q - - - - D P H A P P - - - - - - - - - - - - A G E F A D
gm014043_Glyma0    T Q Q - - - Q G K M S A D S I R K K A T Q V G A R V D A L Q T A L - - - - Q Q S S S T H S I S - - - - - - - S S H V S Y
gm029915_Glyma1    L T G - - - G C D M S A A S I R K K A S E - - - - - - - - - - - - - - - - - - - - - - - - L L S A S C G G G S G D F A V
gm047992_Glyma1    V Q H G A A A G N M S A D S I R R K A T Q V G A R V D A L Q T A L - - - H H H A S S T N S L - - - - - - - - - - - - - -
gm001918_Glyma0    L V A - - - G C D M S A A S I R K K A T E V G A R V D A L Q A T L - - - H H H Y V P P R Q L L S G G - G G G S G D F P V
gm047356_Glyma1    D - - - - - - - - M S A A S I R K K A T E V G A R V D A L H R Q - - - - H P H A L P - - - - - - - - - - - - A G E F A D
 
AT1G46768.1     I K P D L N Q I P E S G D I - - - - - - - - -
gm011914_Glyma0    R - V D L N K I P E P E N - S D C D Y W G G D
gm014043_Glyma0    E K P D L N E Y P K P E D - - - - - - - - - -
gm029915_Glyma1    R V V D L N K M P E P E S - S D C E - W N V N
gm047992_Glyma1    - K P D L N E F P K L E S L Q D - - - - - - -
gm001918_Glyma0    R V V D L N K M P E P E S - S D C E - W D V N
gm047356_Glyma1    R - V D L N K M P E P E N - S D C D Y W D R D
 
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