fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039266 not found in 423aa AT1G47270.1 1st_1st 0.594423320 Ia
Pt001717 not found in 416aa AT1G47270.1 1st_1st 0.608365019 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G47270.1     MDLSLLLPKRSWEISGGADKISRVAMSLKNIVKN---KYKAIGRRGRSHIAPEGS-----
gm039266_Glyma1 ------MPFRSI-----VRELKEIGEGISNMYRRGG-EAKHVHRHGKSHIAPECSLPPPP
pt001717_POPTR_ ------MSFKS--------KLKEIRDDITTTFSMGKLQRNRTNRRGRAYIAPELG-----
                      :. :*        ::..:  .:..       : :   *:*:::**** .     

AT1G47270.1     --SVSSSLSTNEGL-NQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWRE
gm039266_Glyma1 PPPPSSS--------SQSRWANLPPELLLDIIQRLEASETSWPARRALVACASVCRLWRE
pt001717_POPTR_ ----GGSELLSELIEEQSPWANLPPELLQDVIKRVEGSETSWPGRRDVVACASVCTSWRE
                    ..*        .** *.:****** *:*:*:*..:: **.** :*******  ***

AT1G47270.1     MTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSK
gm039266_Glyma1 ITKDVIKTPEQCGLLTFPISLKQPGPRDSPIQCFIRRERMTSTYCLYLGLSPALSGDMSK
pt001717_POPTR_ ITKAVVKTPEQCGCITFPISLKQPGPRDAPIQCFIKRERATSTYHLYLGLSPALSGDMSK
                :** *:*.** .* :******:******:******:*** *. * ************ **

AT1G47270.1     LLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP-----PF
gm039266_Glyma1 LLLAAKKIRRATCTEFIISLVADDFSRACDTYVGKLRSNFLGTKFTILDGEPPHDSSLPL
pt001717_POPTR_ LLLAAKKIRKATSTDFRISFVGSDFCQTSNTYAGKLRSNFLGTKFTIYDSQPPC-PGLKS
                ***:**::*:** ::* :*: ..**.::...* *************: :.:**       

AT1G47270.1     NRKLPP---SMQVSPW-VSSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEG
gm039266_Glyma1 NCKLQQRVHLKQVLPNKV--SAANYKVATVSYELNVLRTRGPRRMRCMMHLIPISAIQEG
pt001717_POPTR_ NCKLQQKVRSIQVSPG-V--PARNFNVATVSYELNVLRTRGPRRMHCIVHSIPISAIQEG
                * **       ** *  *  .: .:::*:: **************:*::* *********

AT1G47270.1     GKIQSPTEFTN----------QGKKKKKP-LMDFCSGNLG--GESVIK--EPLILKNKSP
gm039266_Glyma1 GNAPTPLKFTNYLNDYASTTIPDTKGKKPEVVEFDSTGTDNTPESIQRAREPLILKNKAP
pt001717_POPTR_ GVAPTPLEFNN-PGDEQSPSLSASKVKQP-LIDFISTSRAESSDSICSKMDPLVLKNKAP
                *   :* :*.*            .* *:* :::* * .     :*:    :**:****:*

AT1G47270.1     RWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIF
gm039266_Glyma1 RWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPC---QNVSAAEQEKVILQFGKIGKDIF
pt001717_POPTR_ RWHEQLQCWCLNFKGRVTVASVKNFQLVAAVEPC---QNVPVEEQEKVILQFGKIGKDIF
                ******************************.  .    *:.  **::*************

AT1G47270.1     TMDYRYPISAFQAFAICLSSFDTKPVCE
gm039266_Glyma1 TMDYRYPLSAFQAFAICLSSFDTKPACE
pt001717_POPTR_ TMDYRYPLSAFQAFAICLSSFDTKPACE
                *******:*****************.**
BoxShade v3.31 C (beta, 970507) Output
AT1G47270.1     M D L S L L L P K R S W E I S G G A D K I S R V A M S L K N I V K N - - - K Y K A I G R R G R S H I A P E G S - - - - -
gm039266_Glyma1    - - - - - - M P F R S I - - - - - V R E L K E I G E G I S N M Y R R G G - E A K H V H R H G K S H I A P E C S L P P P P
pt001717_POPTR_    - - - - - - M S F K S - - - - - - - - K L K E I R D D I T T T F S M G K L Q R N R T N R R G R A Y I A P E L G - - - - -
 
AT1G47270.1     - - S V S S S L S T N E G L - N Q S I W V D L P P E L L L D I I Q R I E S E Q S L W P G R R D V V A C A S V C K S W R E
gm039266_Glyma1    P P P P S S S - - - - - - - - S Q S R W A N L P P E L L L D I I Q R L E A S E T S W P A R R A L V A C A S V C R L W R E
pt001717_POPTR_    - - - - G G S E L L S E L I E E Q S P W A N L P P E L L Q D V I K R V E G S E T S W P G R R D V V A C A S V C T S W R E
 
AT1G47270.1     M T K E V V K V P E L S G L I T F P I S L R Q P G P R D A P I Q C F I K R E R A T G I Y R L Y L G L S P A L S G D K S K
gm039266_Glyma1    I T K D V I K T P E Q C G L L T F P I S L K Q P G P R D S P I Q C F I R R E R M T S T Y C L Y L G L S P A L S G D M S K
pt001717_POPTR_    I T K A V V K T P E Q C G C I T F P I S L K Q P G P R D A P I Q C F I K R E R A T S T Y H L Y L G L S P A L S G D M S K
 
AT1G47270.1     L L L S A K R V R R A T G A E F V V S L S G N D F S R S S S N Y I G K L R S N F L G T K F T V Y E N Q P P - - - - - P F
gm039266_Glyma1    L L L A A K K I R R A T C T E F I I S L V A D D F S R A C D T Y V G K L R S N F L G T K F T I L D G E P P H D S S L P L
pt001717_POPTR_    L L L A A K K I R K A T S T D F R I S F V G S D F C Q T S N T Y A G K L R S N F L G T K F T I Y D S Q P P C - P G L K S
 
AT1G47270.1     N R K L P P - - - S M Q V S P W - V S S S S S S Y N I A S I L Y E L N V L R T R G P R R M Q C I M H S I P I S A I Q E G
gm039266_Glyma1    N C K L Q Q R V H L K Q V L P N K V - - S A A N Y K V A T V S Y E L N V L R T R G P R R M R C M M H L I P I S A I Q E G
pt001717_POPTR_    N C K L Q Q K V R S I Q V S P G - V - - P A R N F N V A T V S Y E L N V L R T R G P R R M H C I V H S I P I S A I Q E G
 
AT1G47270.1     G K I Q S P T E F T N - - - - - - - - - - Q G K K K K K P - L M D F C S G N L G - - G E S V I K - - E P L I L K N K S P
gm039266_Glyma1    G N A P T P L K F T N Y L N D Y A S T T I P D T K G K K P E V V E F D S T G T D N T P E S I Q R A R E P L I L K N K A P
pt001717_POPTR_    G V A P T P L E F N N - P G D E Q S P S L S A S K V K Q P - L I D F I S T S R A E S S D S I C S K M D P L V L K N K A P
 
AT1G47270.1     R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A A A E A G K N M N I P E E E Q D R V I L Q F G K I G K D I F
gm039266_Glyma1    R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A A E P C - - - Q N V S A A E Q E K V I L Q F G K I G K D I F
pt001717_POPTR_    R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A V E P C - - - Q N V P V E E Q E K V I L Q F G K I G K D I F
 
AT1G47270.1     T M D Y R Y P I S A F Q A F A I C L S S F D T K P V C E
gm039266_Glyma1    T M D Y R Y P L S A F Q A F A I C L S S F D T K P A C E
pt001717_POPTR_    T M D Y R Y P L S A F Q A F A I C L S S F D T K P A C E
 
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