fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037730 not found in 416aa AT1G47270.1 not_1st 0.603295310 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G47270.1     MDLSLLLPKRSWEISGGADKISRVAMSLKNIVKNKYKAIGRRGRSHIAPE---GSSVSSS
pt037730_POPTR_ ----MSFKGKLKEIR---DDIS-TTFSMGKLQRNR---TNRRGRAYIAPELGGGSELFRE
                    : :  :  **    *.** .::*: :: :*:    .****::****   **.:  .

AT1G47270.1     LSTNEGLNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKV
pt037730_POPTR_ LIE----EQSPWANLPPELLHDVIQRVEGSETSWPGRRDVVACASVCKSWREITKTVVKT
                *      :** *.:****** *:***:*..:: *******************:** ***.

AT1G47270.1     PELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRV
pt037730_POPTR_ PEQCGCITFPISLKQPGPRDAPIQCFIKRERATSTYLLYLGLSPALSGDMNKVLLAAKKI
                ** .* *******:*******************. * ************ .*:**:**::

AT1G47270.1     RRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP---------PFNRKL
pt037730_POPTR_ RKATSTDFRISFAGSDFCQTSNTYVGKLRSNFLGTKFTIYDGQTPCPAMRSNCKP-QRKV
                *:**.::* :*::*.**.::*..*:*************:*:.*.*         * :**:

AT1G47270.1     PPSMQVSPWVSSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTE
pt037730_POPTR_ -RSIQVSPGV--AARNYNVATVSYELNVLRTRGPRRMHCTIHSIPISAIQEGGIAPTPSE
                  *:**** *  :: .**:*:: **************:* :************   :*:*

AT1G47270.1     FTN---------QGKKKKKPLMDFCSGNLGGES----VIKEPLILKNKSPRWHEQLQCWC
pt037730_POPTR_ FNNPSNEQSSPLSASKLKQPPIDFSSNSLAESSDSLCSKNDPLILKNKAPRWHEQLQCWC
                *.*         ...* *:* :**.*..*. .*      ::*******:***********

AT1G47270.1     LNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISA
pt037730_POPTR_ LNFKGRVTVASVKNFQLVAAVEPC---QNVPVEEQEKVILQFGKIGKDIFTMDYRYPLSA
                ********************.  .    *:* ***::********************:**

AT1G47270.1     FQAFAICLSSFDTKPVCE
pt037730_POPTR_ FQAFAICLSSFDTKPACE
                ***************.**
BoxShade v3.31 C (beta, 970507) Output
AT1G47270.1     M D L S L L L P K R S W E I S G G A D K I S R V A M S L K N I V K N K Y K A I G R R G R S H I A P E - - - G S S V S S S
pt037730_POPTR_    - - - - M S F K G K L K E I R - - - D D I S - T T F S M G K L Q R N R - - - T N R R G R A Y I A P E L G G G S E L F R E
 
AT1G47270.1     L S T N E G L N Q S I W V D L P P E L L L D I I Q R I E S E Q S L W P G R R D V V A C A S V C K S W R E M T K E V V K V
pt037730_POPTR_    L I E - - - - E Q S P W A N L P P E L L H D V I Q R V E G S E T S W P G R R D V V A C A S V C K S W R E I T K T V V K T
 
AT1G47270.1     P E L S G L I T F P I S L R Q P G P R D A P I Q C F I K R E R A T G I Y R L Y L G L S P A L S G D K S K L L L S A K R V
pt037730_POPTR_    P E Q C G C I T F P I S L K Q P G P R D A P I Q C F I K R E R A T S T Y L L Y L G L S P A L S G D M N K V L L A A K K I
 
AT1G47270.1     R R A T G A E F V V S L S G N D F S R S S S N Y I G K L R S N F L G T K F T V Y E N Q P P - - - - - - - - - P F N R K L
pt037730_POPTR_    R K A T S T D F R I S F A G S D F C Q T S N T Y V G K L R S N F L G T K F T I Y D G Q T P C P A M R S N C K P - Q R K V
 
AT1G47270.1     P P S M Q V S P W V S S S S S S Y N I A S I L Y E L N V L R T R G P R R M Q C I M H S I P I S A I Q E G G K I Q S P T E
pt037730_POPTR_    - R S I Q V S P G V - - A A R N Y N V A T V S Y E L N V L R T R G P R R M H C T I H S I P I S A I Q E G G I A P T P S E
 
AT1G47270.1     F T N - - - - - - - - - Q G K K K K K P L M D F C S G N L G G E S - - - - V I K E P L I L K N K S P R W H E Q L Q C W C
pt037730_POPTR_    F N N P S N E Q S S P L S A S K L K Q P P I D F S S N S L A E S S D S L C S K N D P L I L K N K A P R W H E Q L Q C W C
 
AT1G47270.1     L N F K G R V T V A S V K N F Q L V A A A A E A G K N M N I P E E E Q D R V I L Q F G K I G K D I F T M D Y R Y P I S A
pt037730_POPTR_    L N F K G R V T V A S V K N F Q L V A A V E P C - - - Q N V P V E E Q E K V I L Q F G K I G K D I F T M D Y R Y P L S A
 
AT1G47270.1     F Q A F A I C L S S F D T K P V C E
pt037730_POPTR_    F Q A F A I C L S S F D T K P A C E
 
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