fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001717 not found in 416aa AT1G47270.1 1st_1st 0.608365019 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G47270.1     MDLSLLLPKRSWEISGGADKISRVAMSLKNIVKNKYKAIGRRGRSHIAPE---GSSVSSS
pt001717_POPTR_ ----MSFKSKLKEIR---DDIT-TTFSMGKLQRNR---TNRRGRAYIAPELGGGSELLSE
                    : : .:  **    *.*: .::*: :: :*:    .****::****   **.: *.

AT1G47270.1     LSTNEGLNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKV
pt001717_POPTR_ LIE----EQSPWANLPPELLQDVIKRVEGSETSWPGRRDVVACASVCTSWREITKAVVKT
                *      :** *.:****** *:*:*:*..:: **************.****:** ***.

AT1G47270.1     PELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRV
pt001717_POPTR_ PEQCGCITFPISLKQPGPRDAPIQCFIKRERATSTYHLYLGLSPALSGDMSKLLLAAKKI
                ** .* *******:*******************. *:************ *****:**::

AT1G47270.1     RRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP----PFNRKLPP---
pt001717_POPTR_ RKATSTDFRISFVGSDFCQTSNTYAGKLRSNFLGTKFTIYDSQPPCPGLKSNCKLQQKVR
                *:**.::* :*: *.**.::*..* *************:*:.***      * **     

AT1G47270.1     SMQVSPWVSSSSSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEFT
pt001717_POPTR_ SIQVSPGV--PARNFNVATVSYELNVLRTRGPRRMHCIVHSIPISAIQEGGVAPTPLEFN
                *:**** *  .: .:*:*:: **************:**:************   :* **.

AT1G47270.1     NQG---------KKKKKPLMDFCSGNLG--GESVIK--EPLILKNKSPRWHEQLQCWCLN
pt001717_POPTR_ NPGDEQSPSLSASKVKQPLIDFISTSRAESSDSICSKMDPLVLKNKAPRWHEQLQCWCLN
                * *         .* *:**:** * . .  .:*: .  :**:****:*************

AT1G47270.1     FKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISAFQ
pt001717_POPTR_ FKGRVTVASVKNFQLVAAVEPC---QNVPVEEQEKVILQFGKIGKDIFTMDYRYPLSAFQ
                ******************.  .    *:* ***::********************:****

AT1G47270.1     AFAICLSSFDTKPVCE
pt001717_POPTR_ AFAICLSSFDTKPACE
                *************.**
BoxShade v3.31 C (beta, 970507) Output
AT1G47270.1     M D L S L L L P K R S W E I S G G A D K I S R V A M S L K N I V K N K Y K A I G R R G R S H I A P E - - - G S S V S S S
pt001717_POPTR_    - - - - M S F K S K L K E I R - - - D D I T - T T F S M G K L Q R N R - - - T N R R G R A Y I A P E L G G G S E L L S E
 
AT1G47270.1     L S T N E G L N Q S I W V D L P P E L L L D I I Q R I E S E Q S L W P G R R D V V A C A S V C K S W R E M T K E V V K V
pt001717_POPTR_    L I E - - - - E Q S P W A N L P P E L L Q D V I K R V E G S E T S W P G R R D V V A C A S V C T S W R E I T K A V V K T
 
AT1G47270.1     P E L S G L I T F P I S L R Q P G P R D A P I Q C F I K R E R A T G I Y R L Y L G L S P A L S G D K S K L L L S A K R V
pt001717_POPTR_    P E Q C G C I T F P I S L K Q P G P R D A P I Q C F I K R E R A T S T Y H L Y L G L S P A L S G D M S K L L L A A K K I
 
AT1G47270.1     R R A T G A E F V V S L S G N D F S R S S S N Y I G K L R S N F L G T K F T V Y E N Q P P - - - - P F N R K L P P - - -
pt001717_POPTR_    R K A T S T D F R I S F V G S D F C Q T S N T Y A G K L R S N F L G T K F T I Y D S Q P P C P G L K S N C K L Q Q K V R
 
AT1G47270.1     S M Q V S P W V S S S S S S Y N I A S I L Y E L N V L R T R G P R R M Q C I M H S I P I S A I Q E G G K I Q S P T E F T
pt001717_POPTR_    S I Q V S P G V - - P A R N F N V A T V S Y E L N V L R T R G P R R M H C I V H S I P I S A I Q E G G V A P T P L E F N
 
AT1G47270.1     N Q G - - - - - - - - - K K K K K P L M D F C S G N L G - - G E S V I K - - E P L I L K N K S P R W H E Q L Q C W C L N
pt001717_POPTR_    N P G D E Q S P S L S A S K V K Q P L I D F I S T S R A E S S D S I C S K M D P L V L K N K A P R W H E Q L Q C W C L N
 
AT1G47270.1     F K G R V T V A S V K N F Q L V A A A A E A G K N M N I P E E E Q D R V I L Q F G K I G K D I F T M D Y R Y P I S A F Q
pt001717_POPTR_    F K G R V T V A S V K N F Q L V A A V E P C - - - Q N V P V E E Q E K V I L Q F G K I G K D I F T M D Y R Y P L S A F Q
 
AT1G47270.1     A F A I C L S S F D T K P V C E
pt001717_POPTR_    A F A I C L S S F D T K P A C E
 
0