fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027814 not found in 706aa AT2G18280.2 1st_not 0.558935361 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G47270.1     MDLSLLLPKRSWEISGGADKISRVAMSLKNIVK--------------------NKYKAIG
Sb027814_Sorbi1 -----------------------AAMSLKSIVRELKEMRDGIGSMSRRGGSGSDGRAGHG
                                       .*****.**:                    :   . *

AT1G47270.1     RRGRSHIAPE--GSSVSSSLSTNEG-----LNQSIWVDLPPELLLDIIQRIESEQSLWPG
Sb027814_Sorbi1 RSGSRHSWPSLWAEQQQPQRQGQEGPQHQHQHQGRWANLPPELLLDVIQRVESSEATWPA
                * *  *  *.  ... ... . :**      :*. *.:********:***:**.:: **.

AT1G47270.1     RRDVVACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIY
Sb027814_Sorbi1 RRQVVACAAVCRSWREVTKEVVKTLEECGRITFPISLKQPGPRDLPVQCFVRRERATSTY
                **:*****:**:****:******. * .* *******:****** *:***::*****. *

AT1G47270.1     RLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTK
Sb027814_Sorbi1 LLYLGLSPSMNMENDKLLLAARKVRRATRTSFVISLVSDDFSHSSSTYVGKLKPNFLGTK
                 *******::. ::.****:*::***** :.**:** .:***:***.*:***:.******

AT1G47270.1     FTVYENQPPPFNRKLP-------PSMQVSPWVSSSSSSYNIASILYELNVLRTRGPRRMQ
Sb027814_Sorbi1 FTIFDSQPPPDAVVLPNNKPSKRQSKQVSPRL--PLGNYNVATVTYELTVLRNRGPRRMQ
                **:::.****    **        * **** :  . ..**:*:: ***.***.*******

AT1G47270.1     CIMHSIPISAIQEGGKIQSPTEF---------TNQGKKKKKPLMDFCSGNLGGE------
Sb027814_Sorbi1 CTMHSIPAECIQEGGKAPTPTGTIQSLDEPVSTSPSTKGKEVALEFSSTSLSADLSGLAL
                * ***** ..******  :**           *. ..* *:  ::*.* .*..:      

AT1G47270.1     -SVIKEPLILKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQ
Sb027814_Sorbi1 ACANETPLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAS---VDPSLNIPAAEQ
                 .. : **:****:**************:***************:   .. .:***  **

AT1G47270.1     DRVILQFGKIGKDIFTMDYRYPISAFQAFAICLSSFDTKPVCE
Sb027814_Sorbi1 EKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLTSFDTKPACE
                ::********************:**********:******.**
BoxShade v3.31 C (beta, 970507) Output
AT1G47270.1     M D L S L L L P K R S W E I S G G A D K I S R V A M S L K N I V K - - - - - - - - - - - - - - - - - - - - N K Y K A I G
Sb027814_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - A A M S L K S I V R E L K E M R D G I G S M S R R G G S G S D G R A G H G
 
AT1G47270.1     R R G R S H I A P E - - G S S V S S S L S T N E G - - - - - L N Q S I W V D L P P E L L L D I I Q R I E S E Q S L W P G
Sb027814_Sorbi1    R S G S R H S W P S L W A E Q Q Q P Q R Q G Q E G P Q H Q H Q H Q G R W A N L P P E L L L D V I Q R V E S S E A T W P A
 
AT1G47270.1     R R D V V A C A S V C K S W R E M T K E V V K V P E L S G L I T F P I S L R Q P G P R D A P I Q C F I K R E R A T G I Y
Sb027814_Sorbi1    R R Q V V A C A A V C R S W R E V T K E V V K T L E E C G R I T F P I S L K Q P G P R D L P V Q C F V R R E R A T S T Y
 
AT1G47270.1     R L Y L G L S P A L S G D K S K L L L S A K R V R R A T G A E F V V S L S G N D F S R S S S N Y I G K L R S N F L G T K
Sb027814_Sorbi1    L L Y L G L S P S M N M E N D K L L L A A R K V R R A T R T S F V I S L V S D D F S H S S S T Y V G K L K P N F L G T K
 
AT1G47270.1     F T V Y E N Q P P P F N R K L P - - - - - - - P S M Q V S P W V S S S S S S Y N I A S I L Y E L N V L R T R G P R R M Q
Sb027814_Sorbi1    F T I F D S Q P P P D A V V L P N N K P S K R Q S K Q V S P R L - - P L G N Y N V A T V T Y E L T V L R N R G P R R M Q
 
AT1G47270.1     C I M H S I P I S A I Q E G G K I Q S P T E F - - - - - - - - - T N Q G K K K K K P L M D F C S G N L G G E - - - - - -
Sb027814_Sorbi1    C T M H S I P A E C I Q E G G K A P T P T G T I Q S L D E P V S T S P S T K G K E V A L E F S S T S L S A D L S G L A L
 
AT1G47270.1     - S V I K E P L I L K N K S P R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A A A E A G K N M N I P E E E Q
Sb027814_Sorbi1    A C A N E T P L V L K N K A P R W H E Q L Q C W C L N F R G R V T V A S V K N F Q L V A S - - - V D P S L N I P A A E Q
 
AT1G47270.1     D R V I L Q F G K I G K D I F T M D Y R Y P I S A F Q A F A I C L S S F D T K P V C E
Sb027814_Sorbi1    E K V I L Q F G K I G K D I F T M D Y R Y P L S A F Q A F A I C L T S F D T K P A C E
 
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