fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039265 not found in 423aa AT1G47270.1 not_1st 0.594423320 II
Gm048089 not found in 410aa AT1G47270.1 not_1st 0.510773130 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G47270.1     MDLSLLLPKRSWEISGGADKISRVAMSLKNI---VKNKY------KAIGRRGRSHIAPEG
gm048089_Glyma1 ------MPFRS------------IVRELKEIGEGISNMYRRGGEAKHVHRHGKSHIAPEC
gm039265_Glyma1 ------MPFRS------------IVRELKEIGEGISNMYRRGGEAKHVHRHGKSHIAPEC
                      :* **            :. .**:*   :.* *      * : *:*:****** 

AT1G47270.1     S------SVSSSLSTNEGLNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCK
gm048089_Glyma1 SLPPPPSSSSSSSSSSS--WQSRWANLPPELLLDIIQRLEASETSWPARRALVACASVCK
gm039265_Glyma1 SLPPPPPPPPSSSS------QSRWANLPPELLLDIIQRLEASETSWPARRALVACASVCR
                *      . .** *      ** *.:************:*:.:: **.** :*******:

AT1G47270.1     SWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSG
gm048089_Glyma1 LWREITKDVVKTPEQCGFITFPISLKQPGPRDSPIQCFIRRERMTSTYCLYLGLSPALSG
gm039265_Glyma1 LWREITKDVIKTPEQCGLLTFPISLKQPGPRDSPIQCFIRRERMTSTYCLYLGLSPALSG
                 ***:**:*:*.** .*::******:******:******:*** *. * ***********

AT1G47270.1     DKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP---
gm048089_Glyma1 DMSKLLLAAKKIRRATCTEFIISLVSDDFSWASNTYVGKLRSNFLGTKFTILDGEPAHET
gm039265_Glyma1 DMSKLLLAAKKIRRATCTEFIISLVADDFSRACDTYVGKLRSNFLGTKFTILDGEPPHDS
                * *****:**::**** :**::** .:*** :...*:*************: :.:*.   

AT1G47270.1     --PFNRKLPPSM---QVSPWVSSSSSSYNIASILYELNVLRTRGP------RRMQCIMHS
gm048089_Glyma1 SLPLNCKLQQRVHLKQVLPNKVAAAANYKVATRSKANAVYDALNPHICNPRRRER-----
gm039265_Glyma1 SLPLNCKLQQRVHLKQVLPNKV-SAANYKVATVSYELNVLRTRGP------RRMRCMMHL
                  *:* **   :   ** *    :::.*::*:      *  : .*      ** :     

AT1G47270.1     IPISAIQEGGKIQSPTEFTN-----------QGKKKKKPLMDFCSGNLGG--ESV--IKE
gm048089_Glyma1 --------------PYSF-----EHASTTTPDSKGKKPEVVEFDSTGTANTPESIQRARE
gm039265_Glyma1 IPISAIQEGGNAPTPLKFTNYLNDYASTTIPDTKGKKPEVVEFDSTGTDNTPESIQRARE
                              * .*             : * **  :::* * .  .  **:   :*

AT1G47270.1     PLILKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQ
gm048089_Glyma1 PLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPC---QNVSAAEQEKVILQ
gm039265_Glyma1 PLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPC---QNVSAAEQEKVILQ
                **:****:********************************  .    *:.  **::****

AT1G47270.1     FGKIGKDIFTMDYRYPISAFQAFAICLSSFDTKPVCE
gm048089_Glyma1 FGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
gm039265_Glyma1 FGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
                ****************:*****************.**
BoxShade v3.31 C (beta, 970507) Output
AT1G47270.1     M D L S L L L P K R S W E I S G G A D K I S R V A M S L K N I - - - V K N K Y - - - - - - K A I G R R G R S H I A P E G
gm048089_Glyma1    - - - - - - M P F R S - - - - - - - - - - - - I V R E L K E I G E G I S N M Y R R G G E A K H V H R H G K S H I A P E C
gm039265_Glyma1    - - - - - - M P F R S - - - - - - - - - - - - I V R E L K E I G E G I S N M Y R R G G E A K H V H R H G K S H I A P E C
 
AT1G47270.1     S - - - - - - S V S S S L S T N E G L N Q S I W V D L P P E L L L D I I Q R I E S E Q S L W P G R R D V V A C A S V C K
gm048089_Glyma1    S L P P P P S S S S S S S S S S S - - W Q S R W A N L P P E L L L D I I Q R L E A S E T S W P A R R A L V A C A S V C K
gm039265_Glyma1    S L P P P P P P P P S S S S - - - - - - Q S R W A N L P P E L L L D I I Q R L E A S E T S W P A R R A L V A C A S V C R
 
AT1G47270.1     S W R E M T K E V V K V P E L S G L I T F P I S L R Q P G P R D A P I Q C F I K R E R A T G I Y R L Y L G L S P A L S G
gm048089_Glyma1    L W R E I T K D V V K T P E Q C G F I T F P I S L K Q P G P R D S P I Q C F I R R E R M T S T Y C L Y L G L S P A L S G
gm039265_Glyma1    L W R E I T K D V I K T P E Q C G L L T F P I S L K Q P G P R D S P I Q C F I R R E R M T S T Y C L Y L G L S P A L S G
 
AT1G47270.1     D K S K L L L S A K R V R R A T G A E F V V S L S G N D F S R S S S N Y I G K L R S N F L G T K F T V Y E N Q P P - - -
gm048089_Glyma1    D M S K L L L A A K K I R R A T C T E F I I S L V S D D F S W A S N T Y V G K L R S N F L G T K F T I L D G E P A H E T
gm039265_Glyma1    D M S K L L L A A K K I R R A T C T E F I I S L V A D D F S R A C D T Y V G K L R S N F L G T K F T I L D G E P P H D S
 
AT1G47270.1     - - P F N R K L P P S M - - - Q V S P W V S S S S S S Y N I A S I L Y E L N V L R T R G P - - - - - - R R M Q C I M H S
gm048089_Glyma1    S L P L N C K L Q Q R V H L K Q V L P N K V A A A A N Y K V A T R S K A N A V Y D A L N P H I C N P R R R E R - - - - -
gm039265_Glyma1    S L P L N C K L Q Q R V H L K Q V L P N K V - S A A N Y K V A T V S Y E L N V L R T R G P - - - - - - R R M R C M M H L
 
AT1G47270.1     I P I S A I Q E G G K I Q S P T E F T N - - - - - - - - - - - Q G K K K K K P L M D F C S G N L G G - - E S V - - I K E
gm048089_Glyma1    - - - - - - - - - - - - - - P Y S F - - - - - E H A S T T T P D S K G K K P E V V E F D S T G T A N T P E S I Q R A R E
gm039265_Glyma1    I P I S A I Q E G G N A P T P L K F T N Y L N D Y A S T T I P D T K G K K P E V V E F D S T G T D N T P E S I Q R A R E
 
AT1G47270.1     P L I L K N K S P R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A A A E A G K N M N I P E E E Q D R V I L Q
gm048089_Glyma1    P L V L K N K A P R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A A E P C - - - Q N V S A A E Q E K V I L Q
gm039265_Glyma1    P L I L K N K A P R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V A A A E P C - - - Q N V S A A E Q E K V I L Q
 
AT1G47270.1     F G K I G K D I F T M D Y R Y P I S A F Q A F A I C L S S F D T K P V C E
gm048089_Glyma1    F G K I G K D I F T M D Y R Y P L S A F Q A F A I C L S S F D T K P A C E
gm039265_Glyma1    F G K I G K D I F T M D Y R Y P L S A F Q A F A I C L S S F D T K P A C E
 
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