fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47655.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040485 not found in 306aa AT1G47655.1 not_1st 0.403361344 II
Pt040486 not found in 264aa AT1G47655.1 not_1st 0.403361344 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G47655.1     MPSEPNQTRPTRVQPSTA-AYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSC
pt040485_POPTR_ MPSEISQTHPNEAQNTMGTAPPPPKTTEPLPCPRCNSTITKFCYFNNYNLSQPRYFCKSC
pt040486_POPTR_ MPSEISQTHPNEAQNTMGTAPPPPKTTEPLPCPRCNSTITKFCYFNNYNLSQPRYFCKSC
                **** .**:*...* : . * ***: :*********** *****:*****:****:****

AT1G47655.1     RRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVIT---------TTTQEP
pt040485_POPTR_ RRYWTKGGTLRDVPVGGGSRK-NSKRSRSSSNNSSPSTSSSNSTASNPATLTAFTAIHEP
pt040486_POPTR_ RRYWTKGGTLRDVPVGGGSRK-NSKRSRSSSNNSSPSTSSSNSTASNPATLTAFTAIHEP
                *****:************:*: .*** ** *..::.*:***.  :         *: :**

AT1G47655.1     --------ATTEASQTKVT-------NLISG---HGSFASLLGLG-----SGNGGLDYGF
pt040485_POPTR_ ESIPVVVSSTTDSGAAAVKTEMPAGINLNEGLAENGNFISLISSNDQHGFNGLGGYGYGS
pt040486_POPTR_ ESIPVVVSSTTDSGAAAVKTEMPAGINLNEGLAENGNFISLISSNDQHGFNGLGGYGYGS
                        :**::. : *.       ** .*   :*.* **:. .     .* ** .** 

AT1G47655.1     GYGYGLEEMSIGYLGDSSVGEIP----------VVDGC--GGDTWQI--GEIEG------
pt040485_POPTR_ GFGLGPCEVGLGF-GARGFWSFPGMENVSVNGGTIGGCTSGCNTWQLQGDHVEGGGSQGG
pt040486_POPTR_ GFGLGPCEVGLGF-GARGFWSFPGMENVSVNGGTIGGCTSGCNTWQLQGDHVEGGGSQGG
                *:* *  *:.:*: *  .. .:*          .:.**  * :***:  ..:**      

AT1G47655.1     -KSGGDSLI--WPGLEISMQT-------NDVK----------------------------
pt040485_POPTR_ FAADGENYFGSWPGLVISAPAEKEVSDHNALKLSFGFEECPGSGFVSSFEKLVNQFIQET
pt040486_POPTR_ FAADGENYFGSWPGLVISAPAEKGLN----------------------------------
                  :.*:. :  **** **  :                                       

AT1G47655.1     --------
pt040485_POPTR_ PNWNLFPV
pt040486_POPTR_ --------
BoxShade v3.31 C (beta, 970507) Output
AT1G47655.1     M P S E P N Q T R P T R V Q P S T A - A Y P P P N L A E P L P C P R C N S T T T K F C Y Y N N Y N L A Q P R Y Y C K S C
pt040485_POPTR_    M P S E I S Q T H P N E A Q N T M G T A P P P P K T T E P L P C P R C N S T I T K F C Y F N N Y N L S Q P R Y F C K S C
pt040486_POPTR_    M P S E I S Q T H P N E A Q N T M G T A P P P P K T T E P L P C P R C N S T I T K F C Y F N N Y N L S Q P R Y F C K S C
 
AT1G47655.1     R R Y W T Q G G T L R D V P V G G G T R R S S S K R H R S F S T T A T S S S S S S S V I T - - - - - - - - - T T T Q E P
pt040485_POPTR_    R R Y W T K G G T L R D V P V G G G S R K - N S K R S R S S S N N S S P S T S S S N S T A S N P A T L T A F T A I H E P
pt040486_POPTR_    R R Y W T K G G T L R D V P V G G G S R K - N S K R S R S S S N N S S P S T S S S N S T A S N P A T L T A F T A I H E P
 
AT1G47655.1     - - - - - - - - A T T E A S Q T K V T - - - - - - - N L I S G - - - H G S F A S L L G L G - - - - - S G N G G L D Y G F
pt040485_POPTR_    E S I P V V V S S T T D S G A A A V K T E M P A G I N L N E G L A E N G N F I S L I S S N D Q H G F N G L G G Y G Y G S
pt040486_POPTR_    E S I P V V V S S T T D S G A A A V K T E M P A G I N L N E G L A E N G N F I S L I S S N D Q H G F N G L G G Y G Y G S
 
AT1G47655.1     G Y G Y G L E E M S I G Y L G D S S V G E I P - - - - - - - - - - V V D G C - - G G D T W Q I - - G E I E G - - - - - -
pt040485_POPTR_    G F G L G P C E V G L G F - G A R G F W S F P G M E N V S V N G G T I G G C T S G C N T W Q L Q G D H V E G G G S Q G G
pt040486_POPTR_    G F G L G P C E V G L G F - G A R G F W S F P G M E N V S V N G G T I G G C T S G C N T W Q L Q G D H V E G G G S Q G G
 
AT1G47655.1     - K S G G D S L I - - W P G L E I S M Q T - - - - - - - N D V K - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt040485_POPTR_    F A A D G E N Y F G S W P G L V I S A P A E K E V S D H N A L K L S F G F E E C P G S G F V S S F E K L V N Q F I Q E T
pt040486_POPTR_    F A A D G E N Y F G S W P G L V I S A P A E K G L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G47655.1     - - - - - - - -
pt040485_POPTR_    P N W N L F P V
pt040486_POPTR_    - - - - - - - -
 
0