fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47655.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018065 not found in 261aa AT1G47655.1 1st_1st 0.411764705 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G47655.1     MPSEPNQTRPTRVQPSTAA-YPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSC
pt018065_POPTR_ MPTEISQGHPTEAQNTMGATHQPPKTTEPLPCPRCNSTTTKFCYYNNYNLSQPRHFCKSC
                **:* .* :**..* : .* : **: :***********************:***::****

AT1G47655.1     RRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVIT----------TTTQE
pt018065_POPTR_ RRYWTQGGTLRDVPVGGGTRK-NSKRSRSTSNNSSSISTSSSNSTSSNSATLTAFTTTHE
                ********************: .*** ** *..::* *:***  *          ***:*

AT1G47655.1     P--------ATTE----ASQTKV-------TNLISGHGSFASLLGLG-----SGNGGLDY
pt018065_POPTR_ PESMPVVLSSTTDSGLAAVKTEVPAGLNLNDGLPSEDGNFISLMNSNDQHGFTGLGGYGY
                *        :**:    * :*:*        .* * .*.* **:. .     :* ** .*

AT1G47655.1     GFGYGYGLEEMSIGYLGDSS----VGEIPVVDG--CGGDTWQI--GEIEGKSGG------
pt018065_POPTR_ ASGFGFGPSEMGIGFGGRGSWSCPVMENVLVNGGTSGCHPWQLDCDHVEG--GGLQAGFT
                . *:*:* .**.**: * .*    * *  :*:*  .* ..**:  ..:**  **      

AT1G47655.1     -DSL----IWPGLEISMQT----NDVK
pt018065_POPTR_ ADTENYFGSWPDLVMSAPAGKGLN---
                 *:      **.* :*  :    *
BoxShade v3.31 C (beta, 970507) Output
AT1G47655.1     M P S E P N Q T R P T R V Q P S T A A - Y P P P N L A E P L P C P R C N S T T T K F C Y Y N N Y N L A Q P R Y Y C K S C
pt018065_POPTR_    M P T E I S Q G H P T E A Q N T M G A T H Q P P K T T E P L P C P R C N S T T T K F C Y Y N N Y N L S Q P R H F C K S C
 
AT1G47655.1     R R Y W T Q G G T L R D V P V G G G T R R S S S K R H R S F S T T A T S S S S S S S V I T - - - - - - - - - - T T T Q E
pt018065_POPTR_    R R Y W T Q G G T L R D V P V G G G T R K - N S K R S R S T S N N S S S I S T S S S N S T S S N S A T L T A F T T T H E
 
AT1G47655.1     P - - - - - - - - A T T E - - - - A S Q T K V - - - - - - - T N L I S G H G S F A S L L G L G - - - - - S G N G G L D Y
pt018065_POPTR_    P E S M P V V L S S T T D S G L A A V K T E V P A G L N L N D G L P S E D G N F I S L M N S N D Q H G F T G L G G Y G Y
 
AT1G47655.1     G F G Y G Y G L E E M S I G Y L G D S S - - - - V G E I P V V D G - - C G G D T W Q I - - G E I E G K S G G - - - - - -
pt018065_POPTR_    A S G F G F G P S E M G I G F G G R G S W S C P V M E N V L V N G G T S G C H P W Q L D C D H V E G - - G G L Q A G F T
 
AT1G47655.1     - D S L - - - - I W P G L E I S M Q T - - - - N D V K
pt018065_POPTR_    A D T E N Y F G S W P D L V M S A P A G K G L N - - -
 
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