fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47655.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018065 not found in 261aa AT1G47655.1 1st_1st 0.411764705 Ia
Pt040485 not found in 306aa AT1G47655.1 not_1st 0.403361344 II
Pt040486 not found in 264aa AT1G47655.1 not_1st 0.403361344 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G47655.1     MPSEPNQTRPTRVQPST-AAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSC
pt040485_POPTR_ MPSEISQTHPNEAQNTMGTAPPPPKTTEPLPCPRCNSTITKFCYFNNYNLSQPRYFCKSC
pt040486_POPTR_ MPSEISQTHPNEAQNTMGTAPPPPKTTEPLPCPRCNSTITKFCYFNNYNLSQPRYFCKSC
pt018065_POPTR_ MPTEISQGHPTEAQNTMGATHQPPKTTEPLPCPRCNSTTTKFCYYNNYNLSQPRHFCKSC
                **:* .* :*...* :  ::  **: :*********** *****:*****:***::****

AT1G47655.1     RRYWTQGGTLRDVPVGGGTRRSSSKRHRSFS------TTATSSSSSSSVIT----TTTQE
pt040485_POPTR_ RRYWTKGGTLRDVPVGGGSRK-NSKRSRSSSNNSSP-STSSSNSTASNPATLTAFTAIHE
pt040486_POPTR_ RRYWTKGGTLRDVPVGGGSRK-NSKRSRSSSNNSSP-STSSSNSTASNPATLTAFTAIHE
pt018065_POPTR_ RRYWTQGGTLRDVPVGGGTRK-NSKRSRSTSNNSSSISTSSSNSTSSNSATLTAFTTTHE
                *****:************:*: .*** ** *      :*::*.*::*.  *    *: :*

AT1G47655.1     P--------ATTEASQTKVT-------NLISGH----GSFASLLGLG-----SGNGGLDY
pt040485_POPTR_ PESIPVVVSSTTDSGAAAVKTEMPAGINLNEGL-AENGNFISLISSNDQHGFNGLGGYGY
pt040486_POPTR_ PESIPVVVSSTTDSGAAAVKTEMPAGINLNEGL-AENGNFISLISSNDQHGFNGLGGYGY
pt018065_POPTR_ PESMPVVLSSTTDSGLAAVKTEVPAGLNLNDGLPSEDGNFISLMNSNDQHGFTGLGGYGY
                *        :**::. : *.       ** .*     *.* **:. .     .* ** .*

AT1G47655.1     GFGYGYGLEEMSIGYLGDSSVGEIPVVD------------GCGGDTWQI-------GEIE
pt040485_POPTR_ GSGFGLGPCEVGLGF-GARGFWSFPGMENVSVNGGTIGGCTSGCNTWQLQGDHVEGGGSQ
pt040486_POPTR_ GSGFGLGPCEVGLGF-GARGFWSFPGMENVSVNGGTIGGCTSGCNTWQLQGDHVEGGGSQ
pt018065_POPTR_ ASGFGFGPSEMGIGF-GGRGSWSCPVMENVLVNGG-----TSGCHPWQLDCDHVEGGGLQ
                . *:* *  *:.:*: *  .  . * ::             .* ..**:       *  :

AT1G47655.1     GKSGGDSL----IWPGLEISMQTNDVK---------------------------------
pt040485_POPTR_ GGFAADGENYFGSWPGLVISAPAEKEVSDHNALKLSFGFEECPGSGFVSSFEKLVNQFIQ
pt040486_POPTR_ GGFAADGENYFGSWPGLVISAPAEKGLN--------------------------------
pt018065_POPTR_ AGFTADTENYFGSWPDLVMSAPAGKGLN--------------------------------
                .   .*       **.* :*  : .                                   

AT1G47655.1     ----------
pt040485_POPTR_ ETPNWNLFPV
pt040486_POPTR_ ----------
pt018065_POPTR_ ----------
BoxShade v3.31 C (beta, 970507) Output
AT1G47655.1     M P S E P N Q T R P T R V Q P S T - A A Y P P P N L A E P L P C P R C N S T T T K F C Y Y N N Y N L A Q P R Y Y C K S C
pt040485_POPTR_    M P S E I S Q T H P N E A Q N T M G T A P P P P K T T E P L P C P R C N S T I T K F C Y F N N Y N L S Q P R Y F C K S C
pt040486_POPTR_    M P S E I S Q T H P N E A Q N T M G T A P P P P K T T E P L P C P R C N S T I T K F C Y F N N Y N L S Q P R Y F C K S C
pt018065_POPTR_    M P T E I S Q G H P T E A Q N T M G A T H Q P P K T T E P L P C P R C N S T T T K F C Y Y N N Y N L S Q P R H F C K S C
 
AT1G47655.1     R R Y W T Q G G T L R D V P V G G G T R R S S S K R H R S F S - - - - - - T T A T S S S S S S S V I T - - - - T T T Q E
pt040485_POPTR_    R R Y W T K G G T L R D V P V G G G S R K - N S K R S R S S S N N S S P - S T S S S N S T A S N P A T L T A F T A I H E
pt040486_POPTR_    R R Y W T K G G T L R D V P V G G G S R K - N S K R S R S S S N N S S P - S T S S S N S T A S N P A T L T A F T A I H E
pt018065_POPTR_    R R Y W T Q G G T L R D V P V G G G T R K - N S K R S R S T S N N S S S I S T S S S N S T S S N S A T L T A F T T T H E
 
AT1G47655.1     P - - - - - - - - A T T E A S Q T K V T - - - - - - - N L I S G H - - - - G S F A S L L G L G - - - - - S G N G G L D Y
pt040485_POPTR_    P E S I P V V V S S T T D S G A A A V K T E M P A G I N L N E G L - A E N G N F I S L I S S N D Q H G F N G L G G Y G Y
pt040486_POPTR_    P E S I P V V V S S T T D S G A A A V K T E M P A G I N L N E G L - A E N G N F I S L I S S N D Q H G F N G L G G Y G Y
pt018065_POPTR_    P E S M P V V L S S T T D S G L A A V K T E V P A G L N L N D G L P S E D G N F I S L M N S N D Q H G F T G L G G Y G Y
 
AT1G47655.1     G F G Y G Y G L E E M S I G Y L G D S S V G E I P V V D - - - - - - - - - - - - G C G G D T W Q I - - - - - - - G E I E
pt040485_POPTR_    G S G F G L G P C E V G L G F - G A R G F W S F P G M E N V S V N G G T I G G C T S G C N T W Q L Q G D H V E G G G S Q
pt040486_POPTR_    G S G F G L G P C E V G L G F - G A R G F W S F P G M E N V S V N G G T I G G C T S G C N T W Q L Q G D H V E G G G S Q
pt018065_POPTR_    A S G F G F G P S E M G I G F - G G R G S W S C P V M E N V L V N G G - - - - - T S G C H P W Q L D C D H V E G G G L Q
 
AT1G47655.1     G K S G G D S L - - - - I W P G L E I S M Q T N D V K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt040485_POPTR_    G G F A A D G E N Y F G S W P G L V I S A P A E K E V S D H N A L K L S F G F E E C P G S G F V S S F E K L V N Q F I Q
pt040486_POPTR_    G G F A A D G E N Y F G S W P G L V I S A P A E K G L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt018065_POPTR_    A G F T A D T E N Y F G S W P D L V M S A P A G K G L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G47655.1     - - - - - - - - - -
pt040485_POPTR_    E T P N W N L F P V
pt040486_POPTR_    - - - - - - - - - -
pt018065_POPTR_    - - - - - - - - - -
 
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