fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G47870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038515 not found in 476aa AT1G47870.1 1st_1st 0.349397590 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G47870.1     MAATSNSGEDPTLSYHHRSPFRFELLQS---------ISSSDPRYSS--LTPSSTNRPFS
pt038515_POPTR_ ---MANASEDPNRTI-NPSQFHFHLLHSHSHFQNQNLFSSSNNSTPSNRLFPSSFRKPHH
                    :*:.***. :  : * *:*.**:*         :***:   .*  * *** .:*. 

AT1G47870.1     VSQSLPNSQLSPL----ISPHWDDSYSQITQKVQKSRKNHRIQLGSIANMSGGESIDIAK
pt038515_POPTR_ LPPPPPDNNKTPIGFQFHSSNTHSAFRDVALGIKSESDDHEVWTNRDAAFPAQSDI-VTD
                :. . *:.: :*:     *.: ..:: :::  ::.. .:*.:  .  * :.. ..* ::.

AT1G47870.1     VIVKQESSP----QNVKRVYNKSKGGTKLLKAGKRMANGEVQNGGLNGASINCRYDSSLG
pt038515_POPTR_ ITLAPRSSSGGKHKNKSRVPKHAKSVT------QRM-NAESLN-GLNLAS-GCRYDSSLG
                : :  .**.    :* .** :::*. *      :** *.*  * *** ** .********

AT1G47870.1     LLTKKFVKLIQEAEDGTLDLNYCAVVLEVQKRRIYDITNVLEGIGLIEKTTKNHIRWKGA
pt038515_POPTR_ LLTKKFVKLIKEAQDGTLDLNKTAEVLEVQKRRIYDITNVLEGIGLIEKTSKNHIRWKKE
                **********:**:*******  * *************************:*******  

AT1G47870.1     -DNLGQKDLGDQISRLKSEVESMQSEESRLDDLIRERQEALRSLEEDDYCRRYMFMTEED
pt038515_POPTR_ FDDCEQRML-DNHARIKAEVESLYTEEFRLEEAIRDRQELLRGLKEDVVCRKHLFLTEED
                 *:  *: * *: :*:*:****: :** **:: **:*** **.*:**  **:::*:****

AT1G47870.1     ITSLPRFQNQTLLAIKAPTASYIEVPDPDEMSFPQQYRMVIRSRMGPIDVYLLSKYK---
pt038515_POPTR_ ITSLSCFQNRTLFAIKTPEASYLEVPDPDEDIGSPLYKMTVRSTNGPIDVYLLSKCKQGE
                ****. ***:**:***:* ***:*******   .  *:*.:**  ********** *   

AT1G47870.1     ----------------------GDSAETSDKLGNESDQKAPVGVDTPS----LKIVTSDT
pt038515_POPTR_ DITAEHVEPMDTSAWNSSQCRDQDAGLPSECQGNQNSCCEPFSSLTLEASGICKLIPADC
                                       *:. .*:  **:..   *..  * .     *::.:* 

AT1G47870.1     DLKADYWFESDAEVSLTDL----------------------------------------W
pt038515_POPTR_ NIIDDYWFTTDDSVSISKLVVGAVVSANVPTARQSERPSLGLGVYCGLGESGASVLMTIW
                ::  **** :* .**::.*                                        *

AT1G47870.1     -----SNFNS-
pt038515_POPTR_ LPVLISNTNNP
                     ** *.
BoxShade v3.31 C (beta, 970507) Output
AT1G47870.1     M A A T S N S G E D P T L S Y H H R S P F R F E L L Q S - - - - - - - - - I S S S D P R Y S S - - L T P S S T N R P F S
pt038515_POPTR_    - - - M A N A S E D P N R T I - N P S Q F H F H L L H S H S H F Q N Q N L F S S S N N S T P S N R L F P S S F R K P H H
 
AT1G47870.1     V S Q S L P N S Q L S P L - - - - I S P H W D D S Y S Q I T Q K V Q K S R K N H R I Q L G S I A N M S G G E S I D I A K
pt038515_POPTR_    L P P P P P D N N K T P I G F Q F H S S N T H S A F R D V A L G I K S E S D D H E V W T N R D A A F P A Q S D I - V T D
 
AT1G47870.1     V I V K Q E S S P - - - - Q N V K R V Y N K S K G G T K L L K A G K R M A N G E V Q N G G L N G A S I N C R Y D S S L G
pt038515_POPTR_    I T L A P R S S S G G K H K N K S R V P K H A K S V T - - - - - - Q R M - N A E S L N - G L N L A S - G C R Y D S S L G
 
AT1G47870.1     L L T K K F V K L I Q E A E D G T L D L N Y C A V V L E V Q K R R I Y D I T N V L E G I G L I E K T T K N H I R W K G A
pt038515_POPTR_    L L T K K F V K L I K E A Q D G T L D L N K T A E V L E V Q K R R I Y D I T N V L E G I G L I E K T S K N H I R W K K E
 
AT1G47870.1     - D N L G Q K D L G D Q I S R L K S E V E S M Q S E E S R L D D L I R E R Q E A L R S L E E D D Y C R R Y M F M T E E D
pt038515_POPTR_    F D D C E Q R M L - D N H A R I K A E V E S L Y T E E F R L E E A I R D R Q E L L R G L K E D V V C R K H L F L T E E D
 
AT1G47870.1     I T S L P R F Q N Q T L L A I K A P T A S Y I E V P D P D E M S F P Q Q Y R M V I R S R M G P I D V Y L L S K Y K - - -
pt038515_POPTR_    I T S L S C F Q N R T L F A I K T P E A S Y L E V P D P D E D I G S P L Y K M T V R S T N G P I D V Y L L S K C K Q G E
 
AT1G47870.1     - - - - - - - - - - - - - - - - - - - - - - G D S A E T S D K L G N E S D Q K A P V G V D T P S - - - - L K I V T S D T
pt038515_POPTR_    D I T A E H V E P M D T S A W N S S Q C R D Q D A G L P S E C Q G N Q N S C C E P F S S L T L E A S G I C K L I P A D C
 
AT1G47870.1     D L K A D Y W F E S D A E V S L T D L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - W
pt038515_POPTR_    N I I D D Y W F T T D D S V S I S K L V V G A V V S A N V P T A R Q S E R P S L G L G V Y C G L G E S G A S V L M T I W
 
AT1G47870.1     - - - - - S N F N S -
pt038515_POPTR_    L P V L I S N T N N P
 
0