fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012761 not found in 329aa AT5G49620.1 1st_not 0.570454545 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48000.1     MNISRTEFANCKTLINHKEEVEEVEKKMEIEIRRGPWTVEEDMKLVSYISLHGEGRWNSL
Os012761_Os03t0 MDMA------------HERDASSEEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSL
                *:::            *:.:... *: *  ::**********: **.**: *********

AT1G48000.1     SRSAGLNRTGKSCRLRWLNYLRPDIRRGDISLQEQFIILELHSRWGNRWSKIAQHLPGRT
Os012761_Os03t0 ARSAGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRT
                :*****:*****************:***:*: ***::***********************

AT1G48000.1     DNEIKNYWRTRVQKHAKLLKCDVNSKQFKDTIKHLWMPRLIERIAATQSVQFTSN-----
Os012761_Os03t0 DNEIKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAAGQQQQQEGGTD
                ***************** *******:****.:::******:*** *: : *  .:     

AT1G48000.1     --------------HYSPE-----------------------NSSVATATSSTSSSEAVR
Os012761_Os03t0 TPPLSWQHGGSDGLYESPELPAPDASCWPAEYCAAAGGAQSGGTPAPELSSTTAGSSSLS
                              : ***                       .:...  :*:*:.*.:: 

AT1G48000.1     SSFYGGDQVEFGTLDHMTNGGYWF---------------------------NGGDTFET-
Os012761_Os03t0 TDSGAGAQPSWPT---QADGAEWFTTACDASSATGGVAMRDTELELAQPPCQGGQTWTTS
                :.  .* * .: *    ::*. **                           :**:*: * 

AT1G48000.1     ------------------LCSFDELNKWLIQ-------------
Os012761_Os03t0 ESSLPGLTFPDLAVADFEIGGFDVDSFWTSMEDDQLWCPTQAAV
                                  : .**  . *
BoxShade v3.31 C (beta, 970507) Output
AT1G48000.1     M N I S R T E F A N C K T L I N H K E E V E E V E K K M E I E I R R G P W T V E E D M K L V S Y I S L H G E G R W N S L
Os012761_Os03t0    M D M A - - - - - - - - - - - - H E R D A S S E E E V M G G D L R R G P W T V E E D L L L V N Y I A A H G E G R W N S L
 
AT1G48000.1     S R S A G L N R T G K S C R L R W L N Y L R P D I R R G D I S L Q E Q F I I L E L H S R W G N R W S K I A Q H L P G R T
Os012761_Os03t0    A R S A G L K R T G K S C R L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P G R T
 
AT1G48000.1     D N E I K N Y W R T R V Q K H A K L L K C D V N S K Q F K D T I K H L W M P R L I E R I A A T Q S V Q F T S N - - - - -
Os012761_Os03t0    D N E I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A G Q Q Q Q Q E G G T D
 
AT1G48000.1     - - - - - - - - - - - - - - H Y S P E - - - - - - - - - - - - - - - - - - - - - - - N S S V A T A T S S T S S S E A V R
Os012761_Os03t0    T P P L S W Q H G G S D G L Y E S P E L P A P D A S C W P A E Y C A A A G G A Q S G G T P A P E L S S T T A G S S S L S
 
AT1G48000.1     S S F Y G G D Q V E F G T L D H M T N G G Y W F - - - - - - - - - - - - - - - - - - - - - - - - - - - N G G D T F E T -
Os012761_Os03t0    T D S G A G A Q P S W P T - - - Q A D G A E W F T T A C D A S S A T G G V A M R D T E L E L A Q P P C Q G G Q T W T T S
 
AT1G48000.1     - - - - - - - - - - - - - - - - - - L C S F D E L N K W L I Q - - - - - - - - - - - - -
Os012761_Os03t0    E S S L P G L T F P D L A V A D F E I G G F D V D S F W T S M E D D Q L W C P T Q A A V
 
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