fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021634 not found in 485aa AT5G49620.1 1st_not 0.568181818 II
Sb007739 not found in 306aa AT1G48000.1 not_1st 0.515909090 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G48000.1     MNISRTEFANCKTLINHKEEVEEVEKKMEIE---IRRGPWTVEEDMKLVSYISLHGEGRW
Sb007739_Sorbi1 MD------------ALWKQGSSSLCDWPAAEAELLRRGPWTVDEDALLAGYVAAHGEGRW
Sb021634_Sorbi1 --------------MAHERDASSEEEVMAGE---LRRGPWTVEEDLLLVNYVAAHGEGRW
                                 :.  ..  .    *   :*******:**  *..*:: ******

AT1G48000.1     NSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGDISLQEQFIILELHSRWGNRWSKIAQHLP
Sb007739_Sorbi1 NELARAAGLRRTGKSCRLRWLNYLRPGVRRGDFTPREQLLILDLHARWGNRWSKIAAHLP
Sb021634_Sorbi1 NSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLP
                *.*:*:***.****************.:***::: :**::**:**:********** ***

AT1G48000.1     GRTDNEIKNYWRTRVQKHAKLLKCDVNSKQFKDTIKHLWMPRLIERIAATQS--------
Sb007739_Sorbi1 GRTDNEVKNYWRTRVQKHAKQLGCDVGSHRFHDAIRNLWMPRLIERIHADETSATAAAA-
Sb021634_Sorbi1 GRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAANASAGGAP
                ******:************* * ***.*::*:*.:: ******:*** *  :        

AT1G48000.1     ----------VQFTSN----------HYSPE-----------------------------
Sb007739_Sorbi1 ---AAAADNVSRYYSS-----------TSPS---HELSSSQPAAAYGNAVPVG-------
Sb021634_Sorbi1 PQPGAAAD--TPLSSSWQQGGADDGLYASPEELPTDACSWPPADCYYPAA-VGDGDHHQL
                              *.            **.                             

AT1G48000.1     ----NSSVATATSSTSSSEAVRSSFYG-GDQVEFGTLDHMTNGGYWFN------------
Sb007739_Sorbi1 ----NCARAPSPDASSS-----------------------VTGSSWSREASPPS------
Sb021634_Sorbi1 LMMNNPAVGPELSSTTAGSSSPSSDSGAGAQPCW--LVAPVGGAEWFTTACDASSAVLAG
                    * : ..  .::::                       . *. *              

AT1G48000.1     ---------------------------------------------------------G--
Sb007739_Sorbi1 ---QLQSSSCSTMAGCSTSTDQCHNNGCSSATSVVDMFDESW-SELLARANHDDTEFGFG
Sb021634_Sorbi1 QQQQQQQSSC--LLGETT----------------------TWASSELPELGVADFEIG--
                                                                         *  

AT1G48000.1     -GDTFETLCSFDELNKWLIQ----
Sb007739_Sorbi1 LGETGDNWWSLED--IWEQPLY--
Sb021634_Sorbi1 -SFDVESIWSMDD-NLWFTQAQGV
                 .   :.  *:::   *
BoxShade v3.31 C (beta, 970507) Output
AT1G48000.1     M N I S R T E F A N C K T L I N H K E E V E E V E K K M E I E - - - I R R G P W T V E E D M K L V S Y I S L H G E G R W
Sb007739_Sorbi1    M D - - - - - - - - - - - - A L W K Q G S S S L C D W P A A E A E L L R R G P W T V D E D A L L A G Y V A A H G E G R W
Sb021634_Sorbi1    - - - - - - - - - - - - - - M A H E R D A S S E E E V M A G E - - - L R R G P W T V E E D L L L V N Y V A A H G E G R W
 
AT1G48000.1     N S L S R S A G L N R T G K S C R L R W L N Y L R P D I R R G D I S L Q E Q F I I L E L H S R W G N R W S K I A Q H L P
Sb007739_Sorbi1    N E L A R A A G L R R T G K S C R L R W L N Y L R P G V R R G D F T P R E Q L L I L D L H A R W G N R W S K I A A H L P
Sb021634_Sorbi1    N S L A R S A G L K R T G K S C R L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P
 
AT1G48000.1     G R T D N E I K N Y W R T R V Q K H A K L L K C D V N S K Q F K D T I K H L W M P R L I E R I A A T Q S - - - - - - - -
Sb007739_Sorbi1    G R T D N E V K N Y W R T R V Q K H A K Q L G C D V G S H R F H D A I R N L W M P R L I E R I H A D E T S A T A A A A -
Sb021634_Sorbi1    G R T D N E I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A N A S A G G A P
 
AT1G48000.1     - - - - - - - - - - V Q F T S N - - - - - - - - - - H Y S P E - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb007739_Sorbi1    - - - A A A A D N V S R Y Y S S - - - - - - - - - - - T S P S - - - H E L S S S Q P A A A Y G N A V P V G - - - - - - -
Sb021634_Sorbi1    P Q P G A A A D - - T P L S S S W Q Q G G A D D G L Y A S P E E L P T D A C S W P P A D C Y Y P A A - V G D G D H H Q L
 
AT1G48000.1     - - - - N S S V A T A T S S T S S S E A V R S S F Y G - G D Q V E F G T L D H M T N G G Y W F N - - - - - - - - - - - -
Sb007739_Sorbi1    - - - - N C A R A P S P D A S S S - - - - - - - - - - - - - - - - - - - - - - - V T G S S W S R E A S P P S - - - - - -
Sb021634_Sorbi1    L M M N N P A V G P E L S S T T A G S S S P S S D S G A G A Q P C W - - L V A P V G G A E W F T T A C D A S S A V L A G
 
AT1G48000.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G - -
Sb007739_Sorbi1    - - - Q L Q S S S C S T M A G C S T S T D Q C H N N G C S S A T S V V D M F D E S W - S E L L A R A N H D D T E F G F G
Sb021634_Sorbi1    Q Q Q Q Q Q Q S S C - - L L G E T T - - - - - - - - - - - - - - - - - - - - - - T W A S S E L P E L G V A D F E I G - -
 
AT1G48000.1     - G D T F E T L C S F D E L N K W L I Q - - - -
Sb007739_Sorbi1    L G E T G D N W W S L E D - - I W E Q P L Y - -
Sb021634_Sorbi1    - S F D V E S I W S M D D - N L W F T Q A Q G V
 
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